Erwinia pyrifoliae Ep1/96: EpC_16930
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Entry
EpC_16930 CDS
T01000
Symbol
rnb
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
epy
Erwinia pyrifoliae Ep1/96
Brite
KEGG Orthology (KO) [BR:
epy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epy03016
]
EpC_16930 (rnb)
Enzymes [BR:
epy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EpC_16930 (rnb)
Transfer RNA biogenesis [BR:
epy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EpC_16930 (rnb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
CAX55472
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All DBs
Position
complement(1921921..1923864)
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKEKLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPFMKKVMHGDRV
SAVIQSEKDREVADPETLIEPFLTRFVGRVQKKDDRLSIIPDHPLLKDAIQCRPERNVKH
DFQTGDWAVAEMRRHPLKGDRTFYAELTEFITTADDHLAPWWVTLSRHNLEREAPDVATP
QEMLDEQLEREDLTALPFVTIDSASTEDMDDALYVEDVGNGVLKLIVAIADPTAYVPVNS
KLDAVAAERAFTNYLPGFNIPMLPRQLSDDICSLRPHERRPVLACRVTLAADGSPADDVQ
FFAAWIESHAKLAYDPVSDWLETEEAGAWQPENEAIANQIRLLNRLCLARSEWRQAHALV
FKDRPDFRFHLGEKGEVLDIIAEHRRIANRIVEESMILANICAANVLRDKLGFGIYNVHH
GFDEVNAGQAAAVLANHGVTADPLAIATLDGFRNLRRELDALPTQFLDSRIRRFQSFAEV
STTPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEESTRPADELTLKMAERRRQ
NRMAERDVGDWLYSRFLQKAVGSEQRFSAEVIDVSRGGMRVRLQENGAVAFIPAPFLHAV
RDELVCSNENGSVQIKGEVVYRVTDLIEVTIAEVRMETRSIVARPVA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctcgcgcagcttaaagagaagctccactcccagacgccg
cgcgttgaaggtgtggtaaaaggcactgaaaaaggtttcggcttcctggaagtcgatgca
caaaaaagttactttatccccccgccgtttatgaaaaaagtcatgcacggtgaccgcgtc
agtgcggttattcaaagcgagaaggatcgcgaagttgccgatccggaaacgctgattgaa
cctttcctgacgcgctttgtcggccgtgtccagaagaaagacgaccggctgtcgattatt
cccgaccatcccctgctgaaagatgctattcaatgccgccctgagcgtaatgtgaagcat
gacttccagaccggcgactgggccgtggctgaaatgcgccgtcacccgctgaagggcgat
cgcaccttctatgccgaactgaccgaatttatcaccacggcggatgatcatctggctcca
tggtgggtcactctttcgcggcataatctggagcgtgaagcgccggatgtcgctacgccg
caagagatgctggatgaacagctggaacgcgaagatcttacggctctgccatttgtcact
atcgacagtgccagcaccgaagatatggacgatgcgctgtatgtggaagacgtcggtaac
ggtgtgcttaagctgatcgttgctatcgctgacccaacagcctatgttccggtgaacagc
aagctggatgcggtcgcggctgaacgcgcgttcaccaactacctgcccggtttcaacatc
ccaatgctgccacgccagctgtcagatgatatctgttcgctacgcccgcatgagcgccgc
ccggtgctggcgtgccgcgttactctcgccgcagatggttcacccgcagacgacgttcag
ttcttcgccgcctggattgaatctcacgctaagctggcgtatgaccctgtttctgactgg
ttagaaaccgaggaagcaggcgcatggcagcctgaaaacgaggcaatcgccaaccagatc
cgcctgctaaaccgcctctgtctggcgcgcagcgagtggcgccaggcgcatgctctggta
ttcaaagaccgcccagacttccgcttccatctgggtgagaaaggtgaagtactggatatt
attgccgaacaccgccgcattgctaatcgtatcgttgaagaatcgatgatccttgctaat
atctgcgctgccaatgtgctgcgtgacaaactgggctttggtatctataacgtccaccac
ggtttcgacgaagtcaatgccgggcaggccgcagcggtactggctaatcatggcgtaacc
gctgacccgctggcgattgccacgctggatggcttccgcaatttgcgccgcgaactggat
gccctgccgactcagttcctcgacagccgtattcgccgcttccagtcatttgccgaagtc
agcaccacgccaggtccgcactttggtctcggcctggaggcatatgccacctggacctcc
ccgatccgtaagtatggcgatatgattaaccaccgcctgctgaaagctatcattaaaggg
gaagaaagcactcgtcctgccgacgaactgacgttgaagatggcggaacgccgccgtcag
aaccgtatggccgagcgcgatgtgggtgactggctgtactcgcgtttcctgcaaaaagcg
gttggtagcgagcagcgtttcagtgcggaagtgattgatgtctcccgtggcggcatgcgt
gtacgcctgcaggaaaacggtgccgttgcttttatccctgccccatttcttcatgccgtg
cgtgatgagctggtatgcagtaacgagaatggcagcgttcaaatcaaaggcgaagtggtt
taccgcgtcaccgacctgattgaagtgacgattgctgaagtacgtatggaaacccgcagt
atcgtcgcccgcccggtagcctga
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