Erwinia pyrifoliae Ep1/96: EpC_18590
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Entry
EpC_18590 CDS
T01000
Symbol
araF
Name
(GenBank) L-arabinose-binding periplasmic protein
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
epy
Erwinia pyrifoliae Ep1/96
Pathway
epy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
epy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EpC_18590 (araF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
epy02000
]
EpC_18590 (araF)
Transporters [BR:
epy02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
EpC_18590 (araF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
DUF1651
PucR
Motif
Other DBs
NCBI-ProteinID:
CAX55638
LinkDB
All DBs
Position
complement(2098680..2099663)
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AA seq
327 aa
AA seq
DB search
MHKLIKTLAAIGFTAVMSHSAYAETMKLGFLVKQPEEPWFQTEWRFADKAGKELGFEVIK
IAIPDGEKTLNAIDSLAASGAKGFVICTPDPKLGAAIMAKARSYDLKVIAVDDQFVTAKG
KPVDSVPLVMMAATKIGERQGNELYKEMQKRGWDAKETAVMAITANELDTARRRTAGSIA
ALKAAGFPEKQIYQVPTKSNDIPGAFDAGNALLVQHAEVKHWLILGMNDNTVLGGVRASE
GQGFNAADVIGIGINGVDAVSELSKVKATGFYGSLLPGPDVHGYRSIKMLHDWVTNGTEP
ARFTEVTDVVLITRDNFKTELAKKGLM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaattgattaaaaccctggccgcgataggttttaccgccgttatgtcacattcc
gcttacgcggaaacgatgaaactcggttttctggtcaagcaaccggaggagccatggttc
cagaccgaatggagattcgccgataaagccggtaaggagctgggttttgaggtgataaaa
attgccataccggacggagaaaaaaccctgaatgccatcgacagcctggcggccagcggc
gctaaaggttttgttatctgcaccccggatcctaaactcggcgcggcgattatggcaaaa
gcgcgtagctatgacctgaaggtgattgccgttgatgaccagtttgtcacggcaaaaggt
aaacctgtagacagcgtgccgctggtgatgatggcggcgaccaaaattggcgaacgtcag
ggcaatgagctgtacaaagagatgcagaaacgcggctgggacgctaaagagacggcggtg
atggccattaccgccaacgaactggataccgcgcgtcgccgcaccgccggatcgattgcg
gcgttaaaagccgccggcttcccggaaaaacagatctaccaggtgccgacgaaatccaat
gatattcccggcgcattcgatgccggtaacgcgttgctggtgcagcatgccgaagttaaa
cactggctgatcctcggcatgaacgataacaccgtgctgggaggcgtgcgcgccagcgaa
gggcagggtttcaacgccgcagatgttatcggtattggcattaacggcgtggatgccgtg
agtgaactgtcaaaagttaaggcgaccgggttctatggatcgctgctgccaggcccggat
gtacacggctatcgcagcatcaaaatgctgcatgactgggtaacaaacggcacagaaccg
gccagatttaccgaagtcaccgacgtggtgctgatcacgcgtgacaacttcaaaaccgag
ctggcgaaaaaagggctgatgtaa
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integrated database retrieval system
