Erwinia pyrifoliae Ep1/96: EpC_27840
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Entry
EpC_27840 CDS
T01000
Symbol
ffh
Name
(GenBank) Signal recognition particle protein (Fifty-four homolog)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
epy
Erwinia pyrifoliae Ep1/96
Pathway
epy02024
Quorum sensing
epy03060
Protein export
epy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
epy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
EpC_27840 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EpC_27840 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EpC_27840 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
epy02044
]
EpC_27840 (ffh)
Enzymes [BR:
epy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
EpC_27840 (ffh)
Secretion system [BR:
epy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
EpC_27840 (ffh)
Eukaryotic Sec-SRP protein
EpC_27840 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_31
AAA_30
Endonuclease_5
Helicase_RecD
AAA_24
VirC1
AAA_33
AAA_16
YqeC
APS_kinase
T2SSE
Wbp11
AIP3
AAA_14
KTI12
Motif
Other DBs
NCBI-ProteinID:
CAX56563
LinkDB
All DBs
Position
complement(3054493..3055854)
Genome browser
AA seq
453 aa
AA seq
DB search
MFDNLTDRLSQTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVRDFIGRVKERAV
GQEVNKSLTPGQEFVKIVKNELVAAMGEENNTLNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFCPSDLSQRPVDIVKNALQQAK
LKFYDVLLVDTAGRLHVDEAMMDEIKQVHAAINPVETLFVVDAMTGQDAANTARAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFMGVGEKTEALEPFYPDRIASRILGMGDM
LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLDQLKQMRNMGGMASLMGKLPGMGQL
PDNVKSQMDDKVLVRMEAMINSMTRKERQKPEIIKGSRKRRIAAGSGMQVQDVNRLLKQF
DDMQRMMKKMKKGGMAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgatagactatcgcaaaccctgcgcaatatcagcggccgtgga
cggctaacagaagacaacattaaagacacgctgcgcgaagtgcgcatggcgctactggaa
gcagacgttgcgctgccggtggtgcgtgactttatcgggcgtgttaaagaacgcgccgtt
ggtcaggaagtgaacaaaagcctgacgccgggccaggagttcgtcaagatcgtgaaaaac
gagctggtggcggcaatgggtgaggagaacaacacgctgaacctggcggcacagccacca
gcggtggttctgatggcgggcctgcagggggcgggtaaaaccaccagcgtcggtaaactc
ggtaaattcctgcgtgaaaagcacaagaaaaaagtgctggtggtgtctgccgacgtctat
cgcccggcggcaattaaacagctggaaacgctggcggagcaggtcggggtagatttttgt
ccgtccgacctgagtcagcggccggtcgatatcgttaaaaatgcattacagcaggcgaag
ctgaaattctacgatgtgctgctggtggataccgccggccgactgcacgttgatgaagcg
atgatggacgagatcaaacaggttcacgccgcgattaacccggtagaaacgctgtttgtt
gtcgatgccatgaccggccaggatgcggccaataccgccagggcgtttaacgaagcgctg
ccgttaaccggtgtggttctgacgaaagtcgatggtgacgcccgtggcggtgcggcgctg
tcgattcgtcatatcaccggtaaaccgattaagtttatgggggtcggtgagaaaaccgag
gccctggaacccttctatcctgaccgcattgcttcgcgtattctgggcatgggcgatatg
ctgtcgctgatcgaagatatcgaaagcaaagtagaccgcgctcaggcggaaaagctggcc
agcaaactgaagaagggtgacggctttgacctgaacgacttcctcgaccagctcaagcag
atgcgtaatatgggcggtatggccagcctgatgggtaaactgccgggcatggggcagctg
ccggataacgttaagtcgcagatggacgacaaagtgctggtgcgcatggaagcgatgatc
aactccatgacgcgcaaagagcgccaaaagccggagattatcaaaggctcgcgcaagcgc
cgcattgctgccggttctggtatgcaggtacaggacgttaaccgcttgcttaagcagttc
gacgatatgcagcgcatgatgaaaaagatgaagaaaggcggtatggcgaaaatgatgcgc
ggcatgaaaggtatgatgccgccgggtttcccaggtcgttaa
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