Equus przewalskii (Przewalski's horse): 103540066
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Entry
103540066 CDS
T04644
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103540066 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103540066 (XAB2)
03041 Spliceosome [BR:
epz03041
]
103540066 (XAB2)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103540066 (XAB2)
Spliceosome [BR:
epz03041
]
Complex B
Other components
Prp19-related factors
103540066 (XAB2)
Complex C
103540066 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
103540066
NCBI-ProteinID:
XP_070478915
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Position
6:complement(5445657..5454869)
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AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRVWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLIARRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDASEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKHAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctctgtcaaatgctggctgcgc
tacatcgaattcaaacagggtgccccaaagcccaggctcaatcagctgtatgagcgggcg
ctgaagctgctgccctgcagctacaaactctggtaccgatacctgaaggcacgccgggcg
caggtgaaacatcgctgcgtgaccgaccccgcctacgaagatgtcaacaactgccacgag
agggcttttgtgttcatgcacaagatgccacgtctgtggctagattattgccagttcctg
atggaccagggccgcgtcacgcacacccgccgcactttcgaccgtgccctccgggcgctg
cccatcacccagcactcccgtgtttggcccctgtacctgcgcttcctgcgctcgcatccg
ctccctgagacggccgtgcggggctaccggcgcttcctcaagctgagccctgagagcgca
gaggagtacatcgagtaccttaagtcaagtgaccggctggacgaggccgcgcagcgcctg
gccaccgtggtgaatgacgagcgctttgtgtccaaggccggcaagtccaactaccagctg
tggcacgagctctgcgacctcatctcccagaacccggacaaggtgcagtcgctcaacgtg
gatgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctgtggtgc
tcgctggctgactactacatccgcagtggccactttgagaaggctcgggacgtgtacgag
gaggccatccggaccgtgatgacggtgcgggacttcacccaggtgttcgacagctacgcc
cagtttgaggagagcatgattgccgccaagatggagacggcctcggagctggggcgggag
gaggaagacgacgtggacctggagctgcgcctggctcgcttcgagcagctcatcgcccgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccacaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgccctcgggagatcatcaacacgtacacggag
gccgtgcagacggtggaccccttcaaggctacaggcaagccccacacgctgtgggttgca
tttgccaagttttacgaggacaacgggcagctggacgatgcccgtgtcattctggagaag
gccaccaaagtgagcttcaagcaggtggatgacctggcaagcgtgtggtgcgagtgtggc
gagctggaactccgccacgagaactacgaccaggctttgcggctgctgcggaaggcgacg
gcgttgcccgcccgccgggccgagtacttcgatgcctcggagcccgtgcagaaccgcgtg
tacaagtcgctgaaggtgtggtcgatgctcgctgacctggaggagagcctcggcaccttc
cagtccaccaaggccgtgtatgaccgcatcctggacctgcgcatcgcaactccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagctttaaggcg
tacgagcgcggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaagttcatcgcccgctacgggggccgcaagctggagcgggcgcgggacctcttt
gaacaggcgctggatggctgccctcccaaacacgccaagacgctctacctgctgtacgcg
cagctggaggaggagtggggcctggcgcggcacgccatggccgtgtacgagcgcgccacc
agggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgggccgcc
gagatctacggggtcacccacacgcgcggcatctaccagaaggccatcgaggtgctgtcg
gacgagcacgcgcgggagatgtgcctgcggtttgcggacatggagtgcaagcttggggag
atcgaccgcgcacgggccatctacagcttctgctcccagatctgcgacccccggacgact
ggggctttctggcaaacgtggaaggacttcgaggtccgacatggcaacgaggacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacgtacaacacgcaggtcaacttc
atggcctcacagatgctcaaggtgtcgggcagcgccacgggtactgtgtctgacctcgcc
cctgggcagagcggcatggacgacatgaaactgctggagcagcgggcggagcagctggcg
gccgaggcggagcgggatcagcccccgcgggcccagagcaagatcctgttcgtgaggagc
gacgcctcccgggaggagctggccgagctggcacagcaagccaaccccgaggagatcgag
ctgggcgaggacgaggacgaggatgagatggacctggagcccaacgaggttcggctggag
cagcagagcgtgccggccgccgtcttcgggagcctgaaggaagactga
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