Equus przewalskii (Przewalski's horse): 103542002
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Entry
103542002 CDS
T04644
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103542002 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
epz01009
]
103542002 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
epz04515
]
103542002 (PCDH20)
Protein phosphatases and associated proteins [BR:
epz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103542002 (PCDH20)
Cell adhesion molecules [BR:
epz04515
]
Cadherins
Protocadherins
103542002 (PCDH20)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103542002
NCBI-ProteinID:
XP_008507123
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Position
16:complement(36660044..36666024)
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AA seq
952 aa
AA seq
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MRGRGNARSSRALAVSWRPATWHPRLDMGHLSRPRSSSSHRTLPHLFLFFLFVGPFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAAGRQDQQSQSPERPGAEWNPPLSFS
LASRGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGAAWGGSISISSSPSSDACLLL
LDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAMDPDI
GTNGVQTYRLLDYHSMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPP
LLGSATLTISISDINDNCPLFTESQINVTVYGNATVGTPIATVQAVDRDLGTNAQITYSY
SQKVPQASKDLFHLDETTGVIKLFSKIGGTVLQTHKLTILANGPGCIPAVITALVSIIKV
IFRPPEIVPRYIANEIDGIVYLKELEPVNTPIAFFTIRDPEGKYKVNCHLDGEGPFRLSP
YKPYNNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKKIVKVQLLDDNDNDPIFLQPL
IELTIEENNTPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDR
EEKEKYRYTVRAVDSGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIG
VISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGE
PALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAV
IAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMV
NLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESVSCMPTLVALSVISLG
SITLVTVMGIYICLRRGKKHHREDENLEVQIPLKGKIDLCMGERKPMDISNI
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggaatgcgcgcagctcccgggccctggcagtgagctggcgcccggcg
acctggcacccgcgcttggatatggggcatctaagtcgtcccaggagcagcagcagccac
agaaccctgccgcatctctttctgttttttctcttcgtgggacccttcaactgcctcgcg
agttacagccgggccacggagcttctgtacagcctgaacgagggactgcccgcgggggtg
ctcatcggcagcctggctgaggacctgcggctggtgcctcgggcagcggggaggcaggac
cagcagtcgcagtcgccagagcgccccggcgctgagtggaaccctcccctgtccttcagc
ctggcctcccggggactgagtggccagtacgtgactctagacaaccgctccggggagctg
cacacttctgcccaggagatcgaccgggaggccttgtgtctggagggaggtggtggggct
gcctggggcggcagcatttccatctcttcctcgccttcctcggatgcttgtcttttgctt
ctggatgttctggtcctgcctcaggaatacttcaggtttgtgaaggtgaaaatcgctatc
cgggacatcaatgacaatgccccgcaattcccggtttcccagatctcggtttgggtccca
gaaaatgcacctgtaaacacccggctggccatagagcatcctgctatggacccagatata
ggcacaaacggggtgcagacctaccgcctgttggactaccacagtatgttcaccctggac
gtagaggagaatgagaatggggagcgcaccccctacctaattgtcatgggactgttggac
agggagacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccacca
ctgttgggcagcgccaccctcaccattagcataagtgacattaatgacaattgccctctc
ttcacagaatcacaaatcaatgtcactgtgtatgggaatgctacagtgggcacaccaatt
gcaactgtccaggctgtggatagagacctgggaaccaatgctcagatcacctactcttac
agccagaaagttccacaagcatccaaggatttattccatctggatgaaaccactggagtc
attaaacttttcagtaagattgggggaactgttctgcaaacacacaagctcaccatcctt
gctaacgggccaggctgcatccctgctgtgatcactgccctcgtgtccattatcaaagtc
attttcagaccacctgaaattgttcctcgttatatagcaaatgagatagatggtattgtt
tacctgaaagaactggaacctgttaacactccgattgcattcttcaccataagagatcca
gaagggaaatacaaggtgaactgccacctggatggtgaaggaccgtttcggttgtcaccc
tacaaaccatacaataatgaatatttgctggaaaccacaaaacctatggactatgagctc
cagcagttctacgaaatagctgtggtggcctggaactctgagggatttcacgtcaaaaaa
attgttaaagttcaacttttagatgacaatgataatgatcctattttccttcagcccttg
atagaactaaccatcgaagaaaacaacacacccaatgcctttttgactaagctgtatgct
acagatgctgacagtggagagagaggccaagtttcatatttcctgggacctgatgctccg
tcatatttttctttagacagtgtcacaggaatcctgaccgtttctactcagctggaccga
gaggagaaagaaaagtacaggtacacggtcagagctgtggactctggaaagccacccaga
gaatccgtagctactgtagctctcacagtgttggataaaaatgacaatagccctcgattc
atcaacaaggactttagcttttttgtgccagaaaactttcccggatatggtgaaattgga
gtaattagtgtaacagacgctgatgctgggcgaaatggatgggtcgctctctcggtagtg
aaccagagtgatatttttgtcatagacacaggaaagggcatgctgagagctaaagtctct
ttggacagagagcagcaaagctcctacactttgtgggttgaagctgttgatgggggtgag
cctgccctctcctctaccgcaaaaatcacaattctccttttagatatcaatgacaaccct
cctcttgttttatttcctcagtctaacatgtcttacctgttggtattaccttctacactc
cctggctcccctgttacagaggtctatgctgttgacaaagacacaggcatgaatgctgtc
atagcttacagcatcatagggagaagaggtcctaggcctgagtcctttaggattgaccct
aaaactggtaacattactttggaggaggcattgctgcagacagattatggactccatcgt
ttactggtgaaagtgagtgatcacggttatcccgaacctctccattccacggtcatggtg
aacctatttgttaatgataccgtcagtaacgagagctacattgagagtcttttaaggaag
gaaccagaaattaatatagaggagaaagaaccacagatctcaatagaaccaactcatagg
aaggttgaatctgtgtcctgtatgcccaccttagtagctctatctgtaataagcttgggg
tctatcacacttgtcacagtgatgggcatatacatctgtttaaggagagggaaaaagcat
cacagggaagatgaaaatctggaagtgcaaattccactaaaaggaaaaattgacttgtgt
atgggagagaggaaaccgatggatatttccaatatttga
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