Equus przewalskii (Przewalski's horse): 103542033
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Entry
103542033 CDS
T04644
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03013
Nucleocytoplasmic transport
epz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103542033 (UPF3B)
03015 mRNA surveillance pathway
103542033 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103542033 (UPF3B)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103542033 (UPF3B)
mRNA cycle factors
P-body specific factors
103542033 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
103542033
NCBI-ProteinID:
XP_008507162
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All DBs
Position
X:complement(96396144..96411863)
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AA seq
482 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDSSKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGELKEEKPRRPEDESGRDYRERDRDYERDQERIL
RERERLKRQEEERRRQKERYEKEKAFKRKEEEVKKEKEALRDKGKKTESTESVGSSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGISHRKEG
EE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcacaggccgaaggagaagcgagtaaccctcttgactcccccg
ggggccacaggcagcggcggtggggcttcgggggacagcagcaaaggggaagataaacag
gatcgaaacaaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctcct
actttgaccaaggagcagcttcaggaacatcttcagcccatgcccgagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagatactaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaagaaaaagacaaagagaagaagagaggaggaaatggaaagaagaagag
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaagccagaaaaaggagatgaaaaagaattggacaaaagagaaaaa
gccaagaaactggacaaagagaatctgaacgatgaaagagccagtgggcaaagttgcaca
ttgcccaagcgttctgatggtgaacttaaagaggaaaagcctaggagacctgaagatgag
agtggcagagactacagggagagggaccgggattacgaacgtgatcaagagcgcatactt
cgggagagagagagactcaagcggcaagaagaagagcgccgcaggcagaaggagcgctat
gagaaggagaaggcttttaaaaggaaggaggaggaagtgaaaaaagagaaagaagcactt
cgggacaaagggaagaagactgaaagtacagaatcagtaggcagctcagaaaaaactgaa
aagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagcaatgcag
ctttaccaaccaggagctcgaagccgaaatcgactctgtccccctgatgacagcaccaag
tctggagattcagcaatagaaaaaaagcaggaaagtggtattagccatagaaaagaagga
gaggagtga
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