Equus przewalskii (Przewalski's horse): 103547140
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Entry
103547140 CDS
T04644
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz04151
PI3K-Akt signaling pathway
epz04382
Cornified envelope formation
epz04510
Focal adhesion
epz04512
ECM-receptor interaction
epz04820
Cytoskeleton in muscle cells
epz04926
Relaxin signaling pathway
epz04933
AGE-RAGE signaling pathway in diabetic complications
epz04974
Protein digestion and absorption
epz05146
Amoebiasis
epz05165
Human papillomavirus infection
epz05200
Pathways in cancer
epz05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103547140 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103547140 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103547140 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103547140 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103547140 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
103547140 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
103547140 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103547140 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
103547140 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103547140 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
103547140 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103547140 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
epz04147
]
103547140 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
epz00536
]
103547140 (COL4A4)
Exosome [BR:
epz04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103547140 (COL4A4)
Glycosaminoglycan binding proteins [BR:
epz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103547140 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103547140
NCBI-ProteinID:
XP_070474513
LinkDB
All DBs
Position
5:complement(15196446..15318409)
Genome browser
AA seq
1683 aa
AA seq
DB search
MAFIRCSFRWTKPLAIDPWSLILILFSVQHVYGSGKKFIGPCGGRDCSACRCFPEKGSRG
QPGLPGLQGPIGPLGPPGPIGIPGEKGRRGDSGPPGGAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGPRGTPGINGYNGSRGDPGLPGERGAPGPGGPPGLPGANGEKGNSVFIFGAIKGI
QGDRGDPGPPGLPGSRGSRGPVGPVGYPGAPGLTGPPGHPGSPGLKGNPGVGVKGQMGDP
GEIGQQGSPGPTLLVQPPDFSLYKGEKGIKGMPGMIGPPGPPGPKGVPGTGEKGEKGVPG
FPGPRGNPGSYGSPGFPGLKGEPGLSGEPGPFGFLGPKGDPGYRGDPGPPGVLTTPSLPL
KGPPGDPGFPGRHGEVGAIGPPGPPGHSGSPGEACAGMMGPPGPRGFPGHPGFPGAAGIP
GRADSAPGKSGNPGPPGLPGAPGLQGPPGSDAIYCTAGHPGPQGMKGKVGPPGRRGSKGE
KGSMGLCACQPGPMGPPGPPGLPGRQGSKGDLGLPGWLGEKGYPGPPGAEGSPGPPGKPG
ASGLPGSKGEKGDMVVSRVKGRKGERGPDGPPGFPGQQGQHGRDGRAGEKGDPGPPGDHE
AAAPGDRGFPGPPGPPGRAGPRGPPGLGFPGLPGQRGPPGAPGRPGSRGPEGVKGQKGDT
IPCNVTYPGRPGPPGFDGPPGPKGFPGPRGAPGLRCLDGVKGQRGQPGLSEIPGPPGFRG
DIGDPGLRGEKGSSPVGPPGSPGSPGVNGQKGIPGDPAYGHPGPPGRRGPSGMPGLKGLR
GDPGRPGAAGPAGMPGFPGLKGPKGREGSAGFPGIPGPPGHSCERGAPGIPGQPGLPGAP
GSPGAPGWKGQRGDVGPPGPAGMKGLPGVPGRPGADGPLGPPGVPGPFGDDGLPGLPGPK
GLQGLPGFPGFPGERGKPGPEGQPGRKGEIGEKGWPGFLGDPGLRGAKGSRGPPGDEGEV
VIIPRKGETGDPGPPGDGGFPGEGGDKGNPGMQGSRGEPGRHGPPGFHRGEPGRNGQPGL
PGPPGPPGSPGLRGIIGFPGFPGDQGQPGSPGPPGLSGVDGRRGPKGNKGDLASQFGPPG
PNGEPGSPGCPGHFGAPGEQGLPGVQGSRGPPGRPGLPGSSGPPGCPGNQGVPGLEGHPG
EMGDPGPRGLMGDPGTPGLPGIKGPPGSPGLNGLHGLKGQKGSEGASGLHEVGPRGPVGI
PGLKGETGDPGSPGISPPGLFGEKGPPGPPGRPGPPGPAGATGRAPTGDIPDSGPPGDQG
PPGPDGLRGTPGPPGPPGSVDLLRGEPGDRGLPGPPGPPGPPGPPGHKGFPGCDGKDGQK
GPMGFPGPPGPPGLPGPPGEKGLLGPPGRQGPSGPPGEPGPPADVDSCPRIPGLPGVPGP
RGPEGEMGPPGMRGPPGPGCKGEPGLDGRRGEDGIPGSPGPPGHKGDMGEAGCPGAPGPP
GPTGDPGPKGLGPGYLSGFLLVLHSQTDGEPTCPVGMPKLWTGYSLLYLEGQEKAHNQDL
GLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLSEEEIRPYISRCA
VCEAPAQAVAVHSQDQSIPACPRTWKSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFR
AAPFLECQGRQGTCHFFANEYSFWLTTVKPDLEFSSAPSPDTLKESQAQRQKISRCQVCL
KYG
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcatttataagatgctctttcaggtggaccaagcccttggccatagatccctggtca
cttatactcattctcttttctgtacaacatgtgtatgggagcggaaagaagtttattggt
ccttgtggaggaagagattgctctgcttgccggtgttttcctgaaaaggggtctaggggt
caaccgggactcccagggttgcagggccctattggacccttgggacctccaggacccatt
ggaattccaggagagaaagggaggagaggtgacagtggccctcctggaggagcaggtgac
aaaggagataagggtccaactggtgtccccggatttccaggtttagacggcatacctggg
cacccaggccctcctggacccagaggcacacctggcataaatggctacaatggctcaaga
ggtgatccagggcttccaggagaaagaggcgctcctggcccaggaggccccccaggcctt
cctggggcaaatggagaaaaaggaaattcagtcttcatttttggtgccattaaaggtatt
cagggtgacagaggggacccaggacctcctggcttaccaggatcaaggggctccagagga
ccagtgggcccagtgggatatccgggagcgccggggttaacaggacctccgggccatcct
gggagtccaggtttgaagggtaatcctggcgtgggagtaaaggggcaaatgggagacccg
ggtgagattggccagcaaggttctccgggacccaccctgttggtacagccacctgatttt
agtctctataaaggagaaaagggtataaaaggaatgcctggaatgattggacctccggga
cctcctggacccaagggagtccctggtactggagaaaaaggagagaaaggtgttcctggg
tttccaggacctcggggtaaccctggttcctatggatctccaggttttccaggattaaag
ggggaaccaggactgtctggagagcctgggccatttggatttcttggtccaaagggggat
cctggatatcgcggggacccagggccaccaggtgttttgacaactccctctcttccactg
aaaggccctccaggggatccagggtttcctggccgccatggagaagtgggggctattgga
ccacctggtccccctggtcactcaggtagcccaggggaagcctgtgcaggcatgatggga
ccccctgggccacgagggtttcctggtcatccaggatttccaggggcagctggtattcct
gggagagctgattctgctccaggaaagtcagggaacccgggaccacctgggttgcctgga
gcaccagggctgcagggacctccaggatcagacgctatatattgtactgctgggcaccct
ggaccacaaggaatgaaaggcaaagtgggtcctccaggaagaagaggctcaaaaggtgaa
aaaggaagcatggggctctgtgcctgccagcccggtcccatgggcccaccaggccctcca
ggacttcctgggaggcagggtagtaagggagacttgggcctccctgggtggcttggagaa
aaaggttacccaggccctcctggtgcagaaggatctccagggccaccaggaaaacctggt
gcttcaggactacctggcagcaaaggagaaaagggcgacatggttgtatcaagagttaaa
gggcgcaaaggagaaagaggtcctgatgggcccccaggatttccaggacagcaaggacaa
catggtcgggatggtcgcgctggagaaaaaggggatccaggacccccaggggatcatgaa
gctgcagccccaggtgatcgagggtttcctggaccgccgggcccacctggcagagcagga
cctagggggcctccaggactgggatttcctggtctaccgggacagagagggccaccagga
gctccaggccgcccgggcagcaggggccctgagggcgtgaagggtcagaaaggtgataca
attccttgtaacgtaacctacccagggaggccaggccctccaggctttgatggacctcca
ggtccaaagggatttccaggtcctcggggcgctcctgggctgaggtgtttggatggggtt
aaaggtcagcgtggccaaccaggactatcagaaatacctggtccacctggctttcgtggt
gacataggcgatccaggtcttagaggtgaaaaggggtcctcccctgtggggcccccaggc
tctccagggtcacctggggtgaatggtcagaaaggaattcccggagaccctgcttatggc
cacccaggacccccgggaaggaggggtccttcagggatgccagggttgaaaggactcaga
ggtgatccaggacgtccaggagctgcagggccagctggcatgcccggattcccgggtctc
aaaggtcccaaaggcagagagggaagtgctgggtttccaggtatcccaggtccacctggc
cattcctgtgaaagaggcgctccagggatcccagggcaaccgggcctccctggggctcca
ggcagtccaggtgccccaggttggaaaggacagcgaggggatgtggggcctcctggacca
gctggaatgaagggcctccctggagtcccgggacggcctggggcagacggacccctggga
ccaccaggagtcccaggcccctttggggatgatggactacctggccttccaggcccaaag
ggactccaggggctgcctggcttcccagggtttccaggagagagaggaaagcctggtcca
gagggacaacctggccgaaagggagaaattggagagaagggttggcctggcttcctggga
gacccgggactgagaggagccaaaggatcgagaggacccccaggagatgaaggagaagtg
gttataattcccagaaagggggaaaccggggatcctggacctcctggagatggtggattc
ccaggagaaggaggtgataaaggcaatcctgggatgcaagggagcagaggagagccggga
agacacggaccacctggatttcacagaggagagcctggtagaaatgggcagccggggctt
cctggacccccaggccctccaggctccccggggctgagaggaatcattggttttccagga
tttccaggtgaccagggtcagccgggttctccagggccccctggactttcaggagttgat
ggaaggagaggacctaaaggaaacaaaggtgaccttgcaagtcagtttggcccccctggt
ccaaatggtgagccaggtagccctggatgtccaggacattttggagctcctggagagcag
ggcttgcctggtgttcaaggatccaggggaccacctggaagaccaggactgcctggctcc
tctggaccaccagggtgtccaggtaatcaaggggtgcctgggctggaaggacatccagga
gagatgggggatcctgggccaagaggcctcatgggggatccagggacaccaggtcttccg
ggaataaaaggtcccccagggtcacccggcctgaatggcttgcatggtttaaagggtcag
aaaggaagcgaaggcgcttcaggtttgcatgaagtgggtccacgcggcccagtgggaata
cctgggctgaaaggggagacgggagaccccgggagcccaggaatttctcctccagggctt
tttggagaaaaaggtcctccagggcccccagggagacctggaccacctggccctgcaggt
gccacaggaagagctcctacgggtgacattcctgactcgggtccacctggagatcaggga
cctcctggccccgatggtctgagaggaacacctgggcctcccggcccccctgggagtgtc
gaccttctgagaggggaaccaggtgaccgtggtcttccagggccaccaggtcccccaggc
cccccaggccctccaggacacaaaggcttcccagggtgtgatggaaaagacggccagaaa
ggacccatgggattcccggggccgccggggccacctggacttcctgggccacctggagag
aagggtttgctgggacctccagggagacaggggccctctggccctccgggtgaacctggg
ccacctgcagatgtggattcctgcccccgaatcccggggcttcctggggtaccaggccca
agaggcccagaaggagagatggggccccctggaatgaggggccccccaggaccagggtgc
aaaggagagcctgggctggatggcaggaggggcgaggatggcatccctgggtctcccggg
cctccaggacacaaaggtgacatgggagaagctggctgccctggagcaccaggccctcct
gggcccactggggatcctgggcccaaagggcttggccctggatacctcagtggcttcctc
ctggttctccacagtcagacagatggagagcccacctgccccgtgggcatgcccaagctc
tggacgggctatagtctgttatacctggaagggcaggagaaagctcacaatcaagacctc
ggcctggcgggatcttgccttcctgtgtttagtacactgccctttgcctactgcaacatc
caccaagtgtgccactatgcccagagaaatgacagatcctattggctggccagcgctgca
cccctgcccatgatgccactctcggaagaggagatccgcccctacatcagccgctgtgct
gtgtgtgaggccccggctcaggcggtggcggtgcacagccaggaccagtccatccccgcg
tgtccgcggacctggaagagcctttggatcgggtactcattcctgatgcacacaggagct
ggggaccaaggaggagggcaggccctcatgtcacctggcagctgcctggaggacttcaga
gcggcaccattccttgaatgccaaggccggcagggcacttgccacttttttgcaaatgag
tatagcttctggctgacaacagtgaaacccgacttggagttctcctcggcaccatcacca
gacaccttaaaagaaagccaggcccagcgccagaaaatcagcaggtgccaggtctgtctg
aagtatggctag
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