Equus przewalskii (Przewalski's horse): 103549273
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Entry
103549273 CDS
T04644
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03410
Base excision repair
epz04140
Autophagy - animal
epz04217
Necroptosis
epz04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103549273 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103549273 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
103549273 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
103549273 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
epz03036
]
103549273 (HMGB1)
03400 DNA repair and recombination proteins [BR:
epz03400
]
103549273 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
epz04147
]
103549273 (HMGB1)
Chromosome and associated proteins [BR:
epz03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
103549273 (HMGB1)
DNA repair and recombination proteins [BR:
epz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
103549273 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
103549273 (HMGB1)
Exosome [BR:
epz04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
103549273 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
103549273
NCBI-ProteinID:
XP_008515751
LinkDB
All DBs
Position
16:complement(9692413..9808002)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagactatgtctgctaaagagaagggaaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacctaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgccccaaaatcaaaggagagcatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgctaagctgaaggagaaatacgaaaaggatattgct
gcataccgagctaaaggaaaacctgatgcagcgaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagacgaagaggatgaggaggaggag
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa
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integrated database retrieval system