Equus przewalskii (Przewalski's horse): 103549474
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Entry
103549474 CDS
T04644
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz04510
Focal adhesion
epz04517
IgSF CAM signaling
epz04518
Integrin signaling
epz04520
Adherens junction
epz04670
Leukocyte transendothelial migration
epz04810
Regulation of actin cytoskeleton
epz04820
Cytoskeleton in muscle cells
epz05100
Bacterial invasion of epithelial cells
epz05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103549474 (VCL)
04518 Integrin signaling
103549474 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103549474 (VCL)
04520 Adherens junction
103549474 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103549474 (VCL)
04810 Regulation of actin cytoskeleton
103549474 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
103549474 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103549474 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
103549474 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
epz04812
]
103549474 (VCL)
04147 Exosome [BR:
epz04147
]
103549474 (VCL)
Cytoskeleton proteins [BR:
epz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
103549474 (VCL)
Exosome [BR:
epz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103549474 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
103549474
NCBI-ProteinID:
XP_008516076
UniProt:
A0ABM2EQV0
LinkDB
All DBs
Position
1:61735245..61832152
Genome browser
AA seq
1221 aa
AA seq
DB search
MGVGRGLAARWRGRGISKGTNNSGSLGPSGSAIGCSDARGRGAREAGYAEGSPESVVGAR
SLSLCGFSASSFPVLCSPRFAAPLAAAMPVFHTRTIESILEPVAQQISHLVIMHEEGEVD
GKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQ
MLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVET
MEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFV
TTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASI
DSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTD
QVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQN
WLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGK
GDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRG
VGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVDQLTAQLADLAARGEGESPQARALA
SQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANF
ENHSGRLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYE
HFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGA
TSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGL
QKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPP
RPPPPEEKDEEFPEQKAGEVINQPMMMAARQLHDEARKWSSKPGNPAAEVGLSVVAEADA
ADAVGFPVPPDMEDDYEPELLLMPSNQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKR
MALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVC
ERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAAS
IKIRTDAGFTLRWVRKTPWYQ
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggggcggggtcttgcagcgcggtggcgggggcggggcatctcgaaggggacc
aataatagtggcagcctgggtccgagcggctctgccattgggtgcagtgacgcgaggggg
aggggcgcccgtgaggctggatacgccgagggaagcccggagtccgtagtcggcgctcgg
agtctgtctctttgcgggttctcggcctcatcgttcccggttctctgtagcccgcggttc
gccgccccgctcgccgccgcgatgccggtgtttcacacgcgcacgatcgagagcatcctg
gagccagtggcgcagcagatctcgcacctggtgatcatgcacgaggaaggcgaggtggac
ggcaaagccatccctgacctcaccgcgcccgtggccgccgtgcaggcggccgtcagcaac
ctcgtccgggttggaaaagagactgttcaaaccactgaggatcagattttaaagagagat
atgccaccagcatttattaaggtcgagaatgcttgcaccaaacttgtccaggcagcccag
atgcttcagtcagacccttactcagtgcctgctcgagattatctaattgatgggtcaagg
ggcatcctctctggcacatcagacctgctcctcaccttcgacgaggctgaggttcgtaaa
attattagagtttgcaaaggaattttggaatatcttacagtggcagaggtggtggaaact
atggaagatttggtcacttacacaaagaatcttggaccaggaatgactaagatggccaag
atgattgacgagaggcagcaggaactaactcaccaggagcaccgagtgatgctggtgaac
tcaatgaacaccgtgaaagagttgctgccagttctcatttcagctatgaagatttttgta
acaactaaaaactcaaaaaaccaaggaatagaggaagctttgaagaatcgcaattttact
gtagaaaagatgagtgctgaaattaatgagatcattcgtgtattacaactcacttcttgg
gatgaagatgcctgggccagcaaggacactgaagccatgaagagagcattggcctccata
gactccaaactgaaccaggccaaaggttggctccgtgaccccagtgcctccccaggggat
gctggtgagcaagccatcaggcagatcttagatgaagctggaaaagttggcgaactctgt
gcaggcaaagaacgcagggagatcttgggaacctgcaaaatgctaggacagatgactgac
caagtggctgacctccgagccagaggacaaggcgcctcaccagtggccatgcagaaagcc
cagcaggtgtctcaaggtctagatgtgctcacagcgaaagtggaaaatgcagcccgcaag
ctggaagccatgaccaactcaaagcagagcattgcgaagaagatcgatgctgctcagaat
tggcttgcagatccaaatggtggaccagaaggagaagaacagattcgaggggctttggct
gaagctcggaaaatagcagaattatgtgatgatcctaaagagagggatgacattttacgt
tctcttggagaaatatctgctctgacttctaaattagcagatctacgaagacaggggaaa
ggagattccccagaggcccgagcattggccaaacaggtggccacggccctgcagaacttg
cagaccaaaaccaacagggctgtggccaacagcagacctgccaaagcagctgtccacctt
gagggcaagattgagcaagcacagcggtggatagataatcccacagtggatgaccgggga
gttggtcaggctgccatccgggggcttgtggccgaagggcatcgtctggctaatgtcatg
atggggccttatcgccaagatcttcttgcaaagtgtgaccgagtggaccagctgacggcc
cagctggctgacctggctgccagaggggaaggggagagtcctcaggcgagagcacttgca
tctcagctccaagactctttaaaggatctgaaagcccggatgcaggaggccatgactcag
gaggtgtcagatgttttcagcgataccacaactcccatcaagctgttggcagttgcggcc
actgcaccccctgatgcacccaatagggaagaggtatttgatgagagagcagctaatttt
gaaaaccattcaggaaggcttggtgccacagcagagaaggcagctgctgttggaactgct
aataaatcaacagtggaaggcattcaggcgtcagtgaagacggcccgagaactcacaccc
caggtcgtctcagctgctcgcatcttacttaggaatcctggaaatcaagctgcttatgaa
cattttgagaccatgaagaaccagtggattgataatgttgaaaaaatgacagggctggtg
gacgaagccattgataccaaatctttgttggatgcttccgaagaagcaattaaaaaagat
ctggacaagtgtaaagtagccatggccaatattcagcctcagatgctggtcgctggggca
accagcattgcccgtcgggccaaccggatcctgctggtggctaagagggaggtggagaac
tctgaggatcccaagttccgtgaggctgtgaaagctgcctctgatgagttgagcaaaact
atctccccaatggtaatggatgcaaaggctgtggctggaaacatttctgatcctggcctg
caaaagagcttcctggactcaggatataggatcctgggagctgttgccaaggtcagagaa
gccttccaacctcaggagcctgacttcccgcctcctccaccagaccttgagcagctccgc
ctgacagatgagcttgctcctcccaaaccacctctgcctgagggagaggtccctcccccc
agacccccaccaccggaggagaaggacgaagagttccctgagcagaaagctggggaggtg
attaatcagccaatgatgatggctgccaggcaactccatgatgaagctcgcaaatggtcc
agcaagccgggtaacccagccgctgaggtgggtctaagtgttgtagctgaggcagatgcg
gccgatgctgttgggttccctgtcccccctgacatggaagacgattacgaacctgagctg
ctgttaatgccatccaatcagccggtcaaccagcccattctggccgcggctcagtcattg
catcgggaagctaccaagtggtctagtaagggcaatgacatcattgcagcagccaagcgc
atggctctgttgatggctgagatgtctcggctggtaagagggggcagtggtaccaagcgg
gcactgattcaatgtgccaaggacatcgccaaggcctcagatgaggtgactcggttggcc
aaggaggttgccaagcagtgcacagataagcgcattagaaccaacctcttacaggtatgt
gagcgaatccccaccataagcacccagctgaaaatcctgtccacagtaaaggccaccatg
ctgggccggaccaacatcagtgatgaggaatctgagcaggccacagagatgctggttcac
aatgcccagaacctcatgcagtctgtgaaggagactgttcgagaagcagaagcagcttca
atcaaaattcgaactgatgctggatttacactgcgctgggttagaaagactccctggtac
cagtag
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integrated database retrieval system