Equus przewalskii (Przewalski's horse): 103549698
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Entry
103549698 CDS
T04644
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X2
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103549698 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103549698 (EDC4)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103549698 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
103549698 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EDC4L
WD40_Prp19
Beta-prop_TEP1_2nd
DUF445
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
103549698
NCBI-ProteinID:
XP_008516426
LinkDB
All DBs
Position
3:18058690..18070230
Genome browser
AA seq
1410 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKPGLRAMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FILEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHNTWPVDVSQIKQGFIVVKGHSTR
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVNVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGASAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHP
AHEDFAFGESRPELGSESLASAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSASLQQITASPSSSSSSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPSLPATRPPE
ELTLSPKLQLDGSLTVSSSSSLQASPRSLLPGLIPGPADKLTSKGPGQVPAAAAALSLEL
QEVEPLGLTQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMAS
AASALHLLSPRPRPGPELGSQLGLDGSPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAP
DITRETCSSLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDVSAEQSDHDDEVASLASA
AGGFGTKVPTPRLPAKDWKTKGSPRASPKLKRKGKKDDGDSAMGSRLMEHQVAELPEDWP
ALIWQQQRELAELRHSQEELLQRLCTQLEGLQSTVMGHVERALESRHEQEQRRLERALAE
GQQRGGQLQEQLTQQLSQALSSAMAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVA
TKLTAVEGSLKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQ
AMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAAT
VSSSVRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAG
TPVPAAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPC
PLSQPVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQ
FLQAEPHNSLGKAARRLSLMLHGLVTPSLP
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccgacccgctgggggccccagtgcagagagccagcggccatctaatgcc
tacaatggggacctcaacgggctcctggtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagcctggtctccgggccatgccacctattaatctgcaggaaaagcaggtc
atctgcctttcaggagatgacagctctacctgcatcgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctctagcaaggcacgggggagcaacaaggtgaaa
atccagcctgttgccaagtatgactgggagcagaaatactactatggcaacctgattgct
gtgtccaattctttcttggcctatgccattcgggctgccaacaatggctcagcgatggtg
cgggtgatcagtgtcagcacttcagagcggaccctgctcaagggcttcacaggcagtgta
gctgatctcgcctttgcacacctcaactccccacagctggcctgcctggatgaggcaggc
aacctatttgtgtggcgcttggctctggttaatggcaaaattcaagaagagattttggtc
catatccggcagccagagggcacaccactgaaccacttccgtaggatcatctggtgcccc
ttcatcctcgaggagagtgaggactgctgtgaggagggcagcccaacagtggccctcttg
catgaggaccgggctgaggtgtgggacctggacatgctgcgctccaatcacaacacctgg
cctgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccatagcacgcgc
ctaagtgaaggagccctctcccctgatgggactgtcctagctaccgcaagccatgatggt
tttgtcaagttctggcagatctacattgagggccaggatgagccaaggtgtctgcatgag
tggaagccacatgatgggcgacccctctcctgcctcctgttctgtgacaaccacaagaaa
caggaccctgaggtccctttctggaggttcctcattactggcgctgaccagaatcgggag
ctaaagatgtggtgcacagtatcctggacctgcctgcagaccattcgcttctccccggat
atcttcagctcagtgaatgtgccccccagcctcaaggtttgcctggatctctcagcagaa
tacttgattctcagcgatgtgcaacggaaggtcctctatgtgatggagctgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcttgctcacccaccctgtg
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcct
gctgaggaggagaatgacagcctaggggctgatgggacccacggagccagtgccatggag
tctgcagctggtgtgctcatcaagcttttttgtgtgcatactaaggcattgcaggatgtg
cagatccgtttccagccacagctgaaccctgatgtggtggccccactccccacccaccct
gcccatgaggactttgcatttggagagtctcggcctgaactgggctccgagagcctggct
tcagctgctcatggctcccagcctgacctccgacgcattgtggagctgcctgcacctgct
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acacctagcgcctccctgcagcagatcactgcatcccccagtagtagcagcagcagcagt
agcagcagcagcagcagcagcagcagcagcagctcctctcttacagctgtgtctgccatg
agcagtacctcagctgtggacccctccttgcccagccttcctgccaccaggccacctgag
gagctgaccttgagccccaagctgcagctggatggcagtctgacagtgagcagcagcagt
agcctgcaggcaagcccacgcagcctcctgcccggcctgatcccaggtccagctgacaaa
ttgacttccaaaggacctgggcaggtgcctgctgctgctgctgcactatccctggagctg
caggaagtggagcccctggggctaacccaggcttcccctagccgcactcgctcgccggat
gttatctcctcagcttcgactgccctgtcccaggacatccctgagattgcatctgaggcc
ctgtcccgtggctttggctcctctgctcctgagggccttgagccagacagtatggcttca
gctgcctcagcactgcacctgctgtccccacggccccgaccagggcctgagcttggctcc
cagcttggcctagatggaagccctggggatggggatcggcatagtaccccttcgctcctg
gaggcggccttgacccaggaggccacagcccctgacagtcaggtctggcctacagcacca
gacattactcgtgagacctgcagcagcctggcagagagccccaggaatggcctccaggaa
aagcacaagagcctggccttccaccgaccaccttatcacctgctgcagcaacatgacagc
caggacgtcagcgctgagcaaagtgaccacgatgatgaggtagccagccttgcctctgct
gcagggggctttggcaccaaagtccccactccacggctgcctgccaaggactggaagact
aagggatcccctcgggcctcacccaagctcaagaggaagggcaagaaggatgatggggat
tcagccatgggatctcggctcatggagcaccaggtggcagagcttcctgaggactggcca
gcattaatttggcaacagcagagagagctggcagagctgcggcacagccaagaagagctg
ctgcagcgtctgtgcacccaacttgagggcctgcagagcactgtcatgggccatgtagaa
cgtgccctagagtcacgacacgagcaggagcagcggcggctggagcgggcattggctgag
gggcagcagcggggtgggcagctgcaggagcagctgacacaacagctgtcccaggcactg
tcttcagctatggctgggcggttggagcggagcatacgagatgagatcaagaagacggta
cctccgtgtgtctctaggagtctggagcccgtggcaggccaactgagcaactcagtggcc
accaagctcacagccgtggagggtagcctgaaagagaatatctccaagctgctaaagtcc
aagaacttgactgacgccattgcccgagcagctgcagacacattacaggggccaatgcag
gctgcctaccgtgaagccttccagagtgtggtgctgcctgcctttgagaagagctgccag
gccatgttccaacagatcaatgatagcttccgactgggcacacaggaatacttgcagcag
ctagagagccacatgaagagccggaaggcacgagagcaggaggcacgggagcctgtgttg
gctcagctaaggggcctggtcagcacactgcaaggtgccactgagcagatggcagccact
gtgtccagcagtgttcgggctgaggtgcagcaccagttgcacgtggctgtgggcagcctg
caggagtcaattttagcacaagtccaacgcattgttaagggtgaggtgagtgtagcactc
aaggagcagcaggctgccgtcacctctagcatcatgcaggccatgcgctcagcagctggc
actcctgtccctgctgcccacctcgactgccaggcccagcaagcccatattctgcagctg
ctgcagcagggccacctcaatcaggccttccagcaggccctgacagctgctgacctgaac
ctggtgctttacgtgtgtgaaactgtggatccaggccaggtttttgggcagccaccctgc
ccactctcccagcccgtgctcctttctctcatccagcagctggcctctgaccttggcact
cgaactgacctcaagctcagctacctggaagaggctgtgatgcacctggaccacagcgac
cccatcactcgggaccacatgggctccgtcatggcccaggtgcgccagaagctcttccag
ttcctgcaggccgagccacacaactcacttggcaaagcggcccggcgtctcagcctcatg
ctgcatggccttgtgacccccagcctcccttag
DBGET
integrated database retrieval system
