Equus przewalskii (Przewalski's horse): 103549760
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Entry
103549760 CDS
T04644
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103549760 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epz03041
]
103549760 (DDX42)
Enzymes [BR:
epz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103549760 (DDX42)
Spliceosome [BR:
epz03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103549760 (DDX42)
Complex B
103549760 (DDX42)
Complex C
U2 SnRNP specific factors
103549760 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
103549760
NCBI-ProteinID:
XP_008516523
LinkDB
All DBs
Position
10:complement(15564202..15602199)
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AA seq
935 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENTDRGNNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQ
KAGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPIVSAAKGIPGFGNTGNLSSAPVTY
PSTGVQGVNNTASGNNSREGIGGGNGKRERYTENRGGSRHSHGESGNRHGDSPRHGDGGR
HGDGYRYPESGSRHADGHRHGENRHGGGGGRHGESRAANDGRNGESRKEGCNRESKMDPK
VDSSKMDKMDSKTDKTADGFAVPEPPKRKKSRWDS
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggccctggcactaagaggggatttggctttggaggttttgcc
attagtgctggaaagaaggaggaaccaaaactcccacaacagtcccacagtgcctttggg
gcaaccagctcttcttctggatttggaaagtcggctccaccacagctcccttctttctat
aaaattggatctaaacgggccaactttgatgaagaaaatgcatattttgaagatgaggaa
gaagactctagcaatgttgatttgccttacattcctgctgaaaactcacctacccgccag
caattccattccaagccggcagattctgacagtgatgatgatcccctggaggcattcatg
gctgaagtggaggatcaggcggctagagacatgaagaggcttgaagaaaaggacaaggaa
agaaaaaatgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcggtacatggcagaaaacccaactgctggtgttgttcaagaggaggaggaagataat
ttggaatatgatagtgatggaaatccaattgcaccttccaaaaaaatcattgatcctctt
cctcccattgatcattcagagattgactatccaccatttgaaaaaaatttttacaatgaa
cacgaagagataaccaacctcaccccacagcagctaattgatctccggcataaactcaat
cttcgggtctctggtgctgcacctcctagaccaggaagtagttttgctcattttgggttt
gatgaacaacttatgcaccagattcggaaatctgagtacacacagcccactccaatacag
tgccagggtgtgcccgtggcattaagtggtagagacatgattggtattgccaaaacaggc
agtggaaaaactgcagccttcatctggcccatgttgattcatattatggaccagaaggaa
ttggaaccaggtgatggaccgattgcagtgattgtgtgtcctacaagggagctttgccag
cagatccatgcagaatgtaagcggtttgggaaagcatataatcttcgatcagtggctgtg
tatggaggaggtagcatgtgggagcaggccaaggcccttcaggaaggggcagaaattgtt
gtgtgtactcccggtcgactgattgatcatgtgaagaagaaagctaccaatctccaaaga
gtctcttaccttgtgtttgatgaagcagatcgaatgtttgacatgggatttgagtaccag
gtgcgctccatagcaagtcatgtgcgtcctgacagacagactctcttattcagtgcaact
tttcggaaaaagattgaaaaactggccagagacatcctgattgaccctattcgtgtggtg
cagggagatattggagaggcaaatgaagatgtgacacagattgttgagattctccattcc
gggcctagtaaatggaactggcttacccggcgtctggtggaatttacctcttcagggagt
gttctcctgtttgttactaaaaaagccaatgctgaagagctagccaataaccttaagcag
gagggtcataatcttgggctgctccatggggacatggatcagagcgaaagaaacaaggtc
atttcagactttaagaaaaaggacatcccagtcttggtggccactgatgttgcagcccgt
ggtctggacattccttcaattaagactgtcattaactatgatgtggcacgagacattgat
acccatactcataggattggccgcacaggacgagcgggtgagaaaggcgtggcctatacc
ttgctgacccccaaggacagcaattttgctggtgaccttgtccggaacttggaaggagcc
aatcaacatgtttctaaggaactcctagacctggcaatgcagaatgcctggtttcggaaa
tcccgtttcaaaggagggaaaggcaaaaagctaaacattggcggaggaggcctaggctac
agggagcggcctggcctaggctctgagaacacggaccgaggaaataacaacaatgtaatg
agcaattacgaagcctacaagccctccacaggagccatgggagatcggctgacggcaatg
aaagcagctttccagtcacagtacaagagtcactttgttgctgctagcttaagcaaccag
aaggctggaagctctgctgctggggcaagtggatggactagtgcagggagcttgaattct
gttccaacaaattcagcccaacagggccataacagtcctgacagccccattgtcagtgcc
gccaagggcatcccaggctttggcaatactgggaacctcagcagtgccccagtgacctac
ccttctactggagtccagggagtcaacaacacagcttcagggaataacagccgagaaggg
attgggggtggcaatgggaaaagagagagatatactgagaaccggggtggcagccgtcac
agtcatggagagagtggcaatcggcatggcgatagcccacgtcatggagatggtggtcgc
catggagatggataccgctacccagaaagcggcagccgtcacgctgatggccatcgtcat
ggggaaaacaggcatggaggaggtggaggccgacatggggagagccgagctgcaaatgat
ggtcggaatggtgagagcaggaaagaaggttgtaaccgtgagagcaagatggaccccaaa
gtggacagcagcaagatggacaagatggacagcaagacagataagacagctgatggtttc
gctgtccctgagccacccaagcgcaagaaaagtcggtgggacagttag
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