Equus przewalskii (Przewalski's horse): 103550674
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Entry
103550674 CDS
T04644
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
epz
Equus przewalskii (Przewalski's horse)
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
epz04515
]
103550674 (PCDHB1)
Cell adhesion molecules [BR:
epz04515
]
Cadherins
Protocadherins
103550674 (PCDHB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Ly49
PLAC8
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
103550674
NCBI-ProteinID:
XP_008517899
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Position
13:complement(34950570..34955860)
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AA seq
818 aa
AA seq
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MAVVRRKLLQSRQVRCLLLLLCVSVGGAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGSKLHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRAE
VRVFDINDNAPIFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANAYFHL
HTRFRSHGPKYAELVLDKPLDREEQAEVNLTITAVDGGSPPKSGTAHIRVEVLDVNDHVP
QFSRLVYRAQVPENSANGSLVAVVTATDLDEGSNKEITYSLAQNTEAILQTFQIDPQTGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVALFSIRDRDIRVGGKLTCFLREDLPFAVKPTFRNSYSLVTDRGLDREEVSGYNI
TLVAVDTGPPSLSTETVIEVLISDINDNPPVFQEDSYILTVRENNSPAVFIGKVHAEDLD
LGENAQVTYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGFL
SLSSQVTVRVIVLDDNDNCPMILYPLQNGSLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDPGLFSVQQQNGEIRTLRQVSERDPMMQKLVILVQDHGQPALSTTASLN
ILLVDGFSEPYLQFRDSSKQSARVNPSTKYLVISLAVLSFLFLLSVTVIFVIHIYQKIKC
REKFTIQEHFYDDCNFPNNLMQGGANGSLSRPCPYEMCSATGTGNSEFRFLKRLMPNFPF
PHGTGEVKTEAGSSLPPDSDSNRSRGSEGHGRVSGDYM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgtgcgcagaaaactcttgcaaagcaggcaagtgaggtgtcttctccttctt
ctgtgtgtgtcggtggggggtgcggcaaccatccgctattcggtggcggaggagatggag
agcggttcgtttgtggctaatgtggctaaagacctggggctggaggtagggaagctggct
gcccgcggggcgcggcttgtctccgagggcagcaaactgcatttccggctccaccgcaag
acgggggatctgttcgtgaaggagaaactggatcgggagtcactttgtggcaaagccgac
ccgtgtgttctgcactttgaaatagtcctggtggagcccctgcagtcctttcgcgccgag
gtcagggtatttgatatcaatgacaatgccccgattttcctaaacaaggagcctctttta
aagattccagagagcactcccctgggttcacgttttcctctacagagcgcccaggatctg
gacgtgggcctcaacggtctccaaaactacaccttgagcgccaatgcgtatttccacctg
cacacccgcttccgaagccacgggcccaaatacgccgagctggtgctggataaacccctg
gacagagaggaacaggctgaggtcaacttgacaatcactgctgtggacggcgggtccccg
cccaagtctggcaccgcccacatccgggtggaggttctagacgtcaatgaccacgtgcct
cagttctcgcgactggtgtaccgcgctcaggtaccagaaaatagcgccaatggttctttg
gtggccgtggtgactgccacggacctagacgagggctccaacaaagagataacttactct
ttagctcagaacacagaagcaattctccagacgttccagattgaccctcaaactggagag
gttcgactacgagggcccctagattttgaagctattgaaacatacgacattgacattcaa
gccacagacggaggaggcctctctgcccacagcaaagtcctggtggaagtagtggatgtg
aatgacaatcctcctgaagtgacggtttcctctgtgtccagccctctccctgaggactcc
ccactacagactgtagtggcccttttctctatccgagaccgggacattcgagtgggagga
aaactcacttgcttcctaagagaagaccttccttttgcagtcaaacctacattccggaat
tcttactcgctggttactgacagaggcttggatcgagaggaggtctcaggctataatatc
acccttgttgccgtggatactggaccacccagtctgtccacggagactgtgatagaggtg
ctaatatctgacattaatgataatcccccagtatttcaggaagactcctacatcttgact
gttcgagaaaacaacagccctgcggtttttattggcaaagttcatgctgaggatttagat
ttgggggagaatgcccaagtaacatattctttgctgcctccaaagagtggagatctatca
gtcttcgcttacatctccataaattcagacaatgggaagctctatgcgctgagaaccatg
gattatgaggccattcaagattttcagtttgtggtaaaggcaactgatgggggcttcctg
tcactgagtagccaggtgactgtcagagtgattgtcctggatgacaatgacaactgccca
atgatcttgtaccctctgcagaatggctccttgccttgcaatgacctggtgcccaggtct
gcagaggcaggctacctggtgaccaaggtggtggctgtggatggtgactcgggtcagaat
tcttggctttcatatcatctacttaaggccactgaccctgggttattctctgttcaacaa
caaaatggggaaatccgtacattgcggcaggtatctgagagagaccccatgatgcagaaa
ctggtcattcttgttcaggatcacggccaaccagctctttccactactgcctcactcaac
atcttgctggtagatggcttttctgagccctatctgcagttccgggattcatccaagcag
tctgcaagggtaaatccatccactaaatatttggtcatttctctggctgtgctttccttt
ctctttctgctctctgtcacagtgatctttgttatacacatctaccagaagattaaatgc
agggaaaagttcacaattcaagagcatttctatgatgactgtaatttccctaacaacctg
atgcaaggaggagccaatggatccttatcccggccttgtccctatgaaatgtgctcggcc
actggcactggcaatagtgagttccggtttcttaagcgccttatgcccaacttccccttc
cctcatgggactggtgaggtaaaaacagaggctggctccagtttaccaccagattctgat
agcaataggtctcgcgggtcagaaggccatggtcgagtatctggtgactatatgtag
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