KEGG   Equus przewalskii (Przewalski's horse): 103550873
Entry
103550873         CDS       T04644                                 
Name
(RefSeq) nucleoporin NUP188 isoform X1
  KO
K14311  nuclear pore complex protein Nup188
Organism
epz  Equus przewalskii (Przewalski's horse)
Pathway
epz03013  Nucleocytoplasmic transport
epz05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:epz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103550873
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103550873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:epz03019]
    103550873
Messenger RNA biogenesis [BR:epz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103550873
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_SH3-like HEAT_SCC3-SA TRS130_4HB Gar1
Other DBs
NCBI-GeneID: 103550873
NCBI-ProteinID: XP_070452906
LinkDB
Position
26:31936617..31984358
AA seq 1751 aa
MAAAAGGPCVRSSRELWTILLGRSALRELNQIEAELSKHWQRLLEGLSYYKPPSPNSAEK
VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRGSLKSVLQDERQSQA
LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQLAQDG
LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLSPDETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVVSHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVRPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTILAARNPAKVWTDLRHTGFLPFVAHQVSNMSQMISAEGMNA
GGYGNLLMNSEQPQGEYGVTIAFLRLIATLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQSLCICSLAYTEAGQTVINI
MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAILAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA
FLIRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH
AVLELIDSQQEDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSVLETCALVMKIICLEIYYVVKGSLDQSLKDTLKKFSSENRFTYWSGYVK
SLAVHTADTEGSSCTSLVEYQMLVSAWRMLLIIATSHAEIMHLTDSAVRRQLFLDVLDGT
KALLLVPASVNCLRLGSMMCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGSAAE
DKDSMETDDCSRLRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL
EVSLRLKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTVQT
PSTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFMGVHQERTLQCLSAVRTV
QSLACLEEADHTVGFILQLSSFMKEWHFHLPQLMRDVQVSLGYLCQACTSLLHSRKMLQH
YLQNKNGDGIPSAVTPRVQRPPTAAPAAPSCSSSKQPSADTEASEQRALHTVQYGLLKIL
SRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVAL
NMLGELDKKKEPLTQAVGLSTQAEGTKTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPR
DKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKSTSLSKASPESQEPLIQ
LVQAFVRHVQR
NT seq 5256 nt   +upstreamnt  +downstreamnt
atggcggcggccgccggcgggccgtgtgtgaggagcagtagagaactgtggacaattctg
cttggaaggtcggctctgagagaactgaatcagattgaggcagaactgagtaaacattgg
cagcggctgttagaggggctttcttactacaaacctcccagtccgaattccgctgaaaaa
gtgaaagctaataaagatgtagcttcacctctgaaggaactgggtttaagaatcagcaag
ttcttgggtcttgatgaagaacagagtgtacagttactccagtgttaccttcaagaggat
tacagaggtacccggggctcactgaagtcagtactgcaagacgagaggcagagccaggcc
ctaatcctgaagattgcagattattactatgaagaaagaacctgtatccttcgttgtgtc
ttacaccttctcacttacttccaagatgaaagacacccctatagggttgagtatgcagac
tgtgttgataaattggagaaggagctagttacaaaatacagacagcagtttgaagagctt
tataaaactgaagcaccaacgtgggagacacatggaaacctcatgactgagcgccaagtg
tctcgctggtttgttcagtgtcttcgggaacagtccatgctgctagaaatcattttcctt
tattatgcatactttgagatggcgcctagtgacttactggtattaaccaagatgtttaaa
gagcaaggatttggtagtaggcagaccaacaggcacctggtggatgagaccatggatcct
tttgtggaccggattggctacttcagtgcccttatcctggtggagggcatggatattgaa
tccttgcataagtgtgctctggatgacaggagagagctgcaccagttggcccaggacggg
cttatttgtcaggatatggaccgtttgatgttgacctttggggacattccacatcatgcc
ccagtgcttttggcttgggctctcctccgtcacaccctgagtccagatgagacaagcagt
gttgtccggaagataggtggcacggccatccagctgaatgtatttcagtacttgacccga
ctactccgctcactagccagtggaggaaatgattgtaccaccagcactgcgtgcatgtgt
gtctatggactcctttctttcgttctgacctcgctggagctgcacacgctgggcaatcag
caggatgtaatcgacacagcatgtgaagtcctggcagacccttctcttccagaactgttc
tggggaacagagccaacctctggtcttgggatcattctggacagtgtgtgtggaatgttt
cctcatctcctctccccgctcctgcagttgctacgagcccttgtatcagggaagtctact
gccaaaaaggtgtatagtttcttggataagatgtctttctacaatgaactttataagcac
aagccccatgatgtggtctcccatgaagatggaactctgtggcggaggcaaacacctaaa
ctcctttatcctcttgggggtcagaccaaccttcgcatacctcaaggcactgtgggccaa
gtaatgctggatgacagggcttacctggtgcgctgggaatactcctacagcagctggacc
ctctttacctgtgagattgaaatgctgcttcatgttgtttccactgcagacgtgattcag
cactgtcagcgggtcagacccatcattgatctggtccataaggtcatcagtacagatctg
tccatagcagactgtctcctgcccatcacgtctcgcatctacatgctgctgcagcggtta
accacagtgatctccccgcctgtggatgtcattgcttcttgtgtcaattgcttgaccatt
ttggctgcccggaaccctgcaaaggtctggactgatcttcgtcacacaggctttttacca
ttcgtggcccaccaggtctccaacatgagtcagatgattagtgcagagggaatgaatgct
ggagggtacggaaacctcttgatgaatagtgaacagccccagggcgagtatggggtcact
attgcctttctgcgcttgatcgccactcttgtcaaggggcagcttggcagtacccagagc
caagggctggtgccctgtgtcatgtttgtgctgaaggagatgcttcctagctaccacaag
tggcgctacaactcacatggtgtgagagaacagattggttgcctgatcctggagctgatt
catgcaatactgaacctgtgccatgagacagacctgcacagcagtcacacccccagcctg
cagtctctctgcatctgcagcctggcctatacagaagcaggacagacagttattaatatc
atgggcatcggcgtggacaccattgacatggtgatggctgctcagccacgcagtgatggg
gcagagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtt
accaacaatgttattcggctgaaacctccttctaatgtggtatcccctctggaacaggct
ctcacacaacatggtgcccatgggaacaacctcattgctattcttgccaaatacatctac
cacaaacatgatcctgctttgccgcgccttgccatccagctgctgaaacgtctggccacg
gtggccccaatgtcagtgtatgcctgtctgggcaatgatgcggctgccattcgagatgcc
ttcctgatccgactacagagcaagattgaggacatgcgcatcaaagtcatgattctagaa
ttcctcacggttgcagtagagactcagccaggcctcattgaactatttctgaatctggag
gtgaaggatggcagtgatggctccaaggaattcagccttggggtatggagctgtctccat
gcggtgctggagctgattgattcccagcaagaggatcgctactggtgcccacccctgctg
catcgtgcggccattgcctttctgcatgccctgtggcaggaccgtcgggacagtgccatg
ttggtcctcagaaccaaacccaagttttgggagaatttaaccagtccactgtttggcacc
ctttctcctccctcagaaacatctgagcccagcgtcctggaaacttgtgccctcgtcatg
aagataatttgcttggagatatactatgtagttaagggctcattagaccagtcattaaaa
gatacactcaagaaattttccagcgagaatcgcttcacctactggtcagggtatgtcaag
tccttggcagttcacacggctgacacagagggcagcagctgcacctccttggtagagtat
cagatgctggtctccgcctggaggatgcttctcatcattgccacaagtcacgcggagata
atgcacctgaccgactctgcagtgcgtcgccagctctttcttgacgtgcttgatgggacc
aaagcgttactcctagtcccggcctcagtgaactgcctccgcctcggctccatgatgtgc
actctgctgctcatcctcctccggcagtggaagagagagttaggttctgtggatgaaatc
ctcggaccgttgacggagatattggagggagtgctgcaggcagaccagcaactcatggag
aagaccaaggccaaggtgttctcagcattcatcacagtgttgcagatgaaggagatgaga
gtgagtgacatccctcagtactcccagctggtgctgaatgtctgtgagaccctccaggaa
gaggtgattgcactcttcgaccagacccgccatagtctggcttcgggcagtgccgcggag
gacaaggacagcatggagactgatgactgctcacggctccgccacaaggaccagcgtgat
ggggtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggatgaggatggt
gactcgtggctgcaggtgacccgcaggctccccatcctgccgaccctcctcactacccta
gaggtgagccttcgcctgaagcagaacctgcacttcactgaggcggcgctgcacctgctc
ctcaccctggctcgcacccagcagggagccacagcagtggctggagccggcatcacccag
agcatttgtttgcccctcctgagtgtgtaccagctcagcaccaatgggacggtgcagaca
cccagcacttctcggaaatccctggatgccccctcttggccgggggtctaccgcctgtca
atgtctttgatggagcggctccttaaaactctgcgctacaacttcctcaccgaggccctg
gacttcatgggcgttcatcaggaacggaccctacagtgcctcagtgcggtgaggacagtg
cagagtctggcctgcctggaggaggcggaccacactgtgggcttcattctgcagctctcc
agcttcatgaaggaatggcacttccacctgcctcagctcatgcgggatgtccaggtcagc
ctgggctacttgtgccaggcctgcacctccctcctgcacagccgcaagatgctgcagcac
tacctgcagaacaaaaatggggacggtatcccctcggctgtcacccctcgagttcagcgg
ccacccacagctgcccctgctgccccctcctgctcttcctccaagcagccctctgctgac
acagaggcctcggagcagcgagccttgcacacagtccagtacggccttctcaagatcctc
agcaggaccctggcggccctgcgccacttcaccccggacgtctgccagatcctgctggac
cagtccctggaccttgctgaatacaacttcctatttgccctgagctttaccactcccacc
tttgactctgaagtggccccttccttcgggacccttctggccacagtgaatgtggcccta
aacatgcttggagagctggacaagaaaaaggagccactcacccaggctgtggggctcagc
acacaggcggaagggaccaaaacactgaagtctctcctcatgtttaccatggaaaactgc
ttctacctgctcatctcccaggcaatgcgttaccttagggacccagctgtgcacccccgg
gacaaacagcggatgaagcaggagctcagctcagagttgagcacgctgctttccagcctc
tcgcgctacttccgccggggagcccccagctcccctgctgctggtgtcctcccctcgcct
cagggcaagtccacctctctctccaaggccagccctgagagtcaggagcctctgatccag
ctagtgcaggcctttgtccgacacgtgcaaagatag

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