KEGG   Equus przewalskii (Przewalski's horse): 103551719
Entry
103551719         CDS       T04644                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
epz  Equus przewalskii (Przewalski's horse)
Pathway
epz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:epz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103551719 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:epz03041]
    103551719 (CDC40)
Spliceosome [BR:epz03041]
 Complex C
  Other components
   Step II factors
    103551719 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 WDR54 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 103551719
NCBI-ProteinID: XP_008519512
LinkDB
Position
9:59364067..59412482
AA seq 579 aa
MSAAIAALAASYGSGSGSESDSDSEGGRCPLPAADSLMHLTKSPSAKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtcggctgcgattgcagctctggcagcttcctatggttcgggttcagggtccgaatcg
gactcggacagtgagggcggacggtgtccgctgccagccgccgactctctcatgcacttg
acgaaatcgccttcggccaagccctctctggcggtggcggtggactcggctccggaggtg
gcagttaaggaagacttggagactggagttcaccttgaccctgctgttaaagaggttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgctcctagaaatatgctttctgggtatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacatatggttatgcattggac
ccttcgttagataatcatcaagtgtctactaaatatattggctctgtagaagaagctgaa
aaaaatcaaggtttaactgtgtttgaaactggtcagaagaaaatagaaaagaggaaaaag
ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccatgggcaaaatatgtg
gatgaaaaagatgtagccaaaccttcagaagaagaacaaaaagaattggacgaaatcaca
gcaaagaggcagaaaaaaggcaaacaagaagaagagaaacctggggaggaaaagacaatc
ttacatgttaaagaaatgtatgactatcaaggcaggtcctatcttcacatacctcaggat
gttggtgtcaatctgcggtcaactgtgccacctgagaagtgttatcttcccaaaaaacaa
attcatgtgtggtccggacacacaaagggcgtcagcgcagtcagactgtttcctctctcc
ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttatgga
gacaggcgctgtctgcgaacatttattggtcacagtaaagctgtgagggacatctgcttt
aatactgcagggacacagttcctcagcgcagcttacgacaggtatctgaagctctgggac
actgagacaggacagtgtatatcaagatttacaaatcgaaaagtaccctactgtgtcaaa
tttaatcctgatgaagataagcaaaatctctttgtggctgggatgtctgataaaaagatt
gtgcaatgggacattcgaagtggagaaattgtgcaggaatatgatcggcatttgggagct
gtcaacaccattgtttttgttgatgagaataggagatttgtgagcacatctgatgataag
agcctaagagtttgggaatgggatatccctgtggatttcaagtatatagcagaacccagt
atgcactcaatgcccgcagtgactttgtctccaaatgggaaatggctagcatgccaatca
atggacaaccaaatcttaatttttggagcacagaacagatttagattaaataagaaaaaa
atctttaagggccatatggtagcaggctatgcttgtcaggtggacttttccccagacatg
agttatgtgatttcaggagatggaaatggaaaattaaatatctgggactggaagaccaca
aaactctacagccggtttaaagctcatgataaagtgtgtatcggtgcagtgtggcatcct
cacgaaacctccaaagtcatcacgtgtggttgggatggcctcattaaactgtgggattaa

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