Equus przewalskii (Przewalski's horse): 103551728
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Entry
103551728 CDS
T04644
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X2
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103551728 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epz03041
]
103551728 (DHX38)
Enzymes [BR:
epz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103551728 (DHX38)
Spliceosome [BR:
epz03041
]
Complex C
Other components
Step II factors
103551728 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
103551728
NCBI-ProteinID:
XP_008519526
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All DBs
Position
3:complement(21665138..21683818)
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AA seq
1226 aa
AA seq
DB search
MEDISEDASIHRLEGTDLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSRISSYKDWEESKDDQRDTEEEGSDQAGRSSRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDSDRKRDRDERDRSRHSS
RSERDGGSERSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSKRSQWESPSPTPSYRD
SERSHRPSSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREDGE
EGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQK
RISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRI
VFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGV
KKEEEPDKALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQEL
LTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEM
GGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNT
DVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQE
DYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQ
LPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQ
IYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL
GVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIV
SCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNN
NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA
AKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWL
AELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRS
TKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcagcgaggatgcctcgatccatcgattggaaggcactgatctagactct
caggttggcggtcttatttgtaagaccaaaagtgcagccagtgagcaacatgtcttcaag
gcccctgctccccgcccttcattgctgggactggacttattggcttccttgaaacgaagg
gagcgagaggagaaggatgatggggaggacaagaagaagtccagaatctcttcctacaag
gactgggaagagagcaaggatgaccagagagacactgaggaggagggcagtgaccaggct
ggccgaagtagccgaaaagacagacattatcgatctgctcgggtagagactccctcccat
cctggtggtgtgagtgaagagttttgggaacgcagtcggcagagagagcgggagcggcgg
gaacatggtgtttatgcctcgtccaaagaagaaaaggatcggaagaaggagagatcgcgg
gatcgagactctgaccgcaagagagacagagatgagcgggatagaagcaggcacagcagc
agatcggagcgagacggagggtcagagcgcagcagaagaaatgaaccggaaagcccgcga
caccgacctaaagatgcagccaccccttcaaggtccacctgggaggaagaggacagtggc
tatggctcctcaaagcgttcgcagtgggaatcgccctccccgacaccttcctatcgggat
tctgagcggagccaccggccatccagtcgagatcgggataggtctgtgaggagcaggtac
tcagatgatacacctctgccaaccccatcctacaaatacaacgagtgggccgatgacaga
agacacctggggtccaccccgcgtctgtccaggggccgaggaagacgcgaggatggtgaa
gaaggaatttcgtttgacacagaagaggagcggcagcaatgggaagatgaccagaggcaa
gctgaccgggattggtacatgatggatgagggatacgatgagttccacaatccgctggcc
tattcctccgaggactacgtgaggaggcgggagcagcatctgcataaacagaagcagaag
cgcatttcggctcagcggagacagatcaatgaggataacgagcgctgggagaccaaccgc
atgctcaccagtggggtggtccatcggctggaggtggacgaggactttgaagaggatagc
gcagccaaggtgcatctgatggtgcataatctggtgcctccctttctggacgggcgcatt
gtctttaccaagcagccagagcctgtgattccagtcaaggatgccacttctgatctggct
attattgctcgaaaaggcagtcaaacggtgcggaagcacagggagcaaaaggaacgcaaa
aaggctcaacacaaacattgggaactagctggaaccaaactgggagatataatgggtgtc
aaaaaagaggaagagccggataaagctctgacggaagatggcaaagtggactacaggaca
gagcagaagtttgcagaccacatgaagaaaaagagtgaagccagcagtgaattcgcgaaa
aagaagtcaattctggagcagaggcagtacctgcccatcttcgcggtgcagcaggaactg
ctcactattatcagagataacagcatcgtgattgtggtcggggagacagggagtggtaag
accactcagctgacgcagtacttgcacgaagatggttacacggactacgggatgattggg
tgcacccagccccggcgtgtggctgccatgtcggtggccaagagagtcagtgaagagatg
gggggaaacctgggcgaggaggtggggtatgccatccgcttcgaagactgcacttccgaa
aataccttgattaaatacatgacggacgggatcctgctccgagagtccctccgggaagct
gacctggatcactacagtgccatcatcatggacgaggcccacgagcgctctctcaacacg
gacgtgctttttgggctgctccgggaggtggtggctcggcgctcagacctgaagctcatt
gtcacatcagccactatggatgcagagaaatttgcttccttttttgggaatgttcccatc
ttccacatccctggtcggaccttccctgttgatatccttttcagcaagaccccgcaggag
gattacgtggaggccgcagtgaagcagtccttgcaggtgcacctgtcaggggccccaggg
gacatccttatcttcatgcctggccaggaggacattgaggtgacctcagaccagattgtg
gaacatctggaagaactggagaatgcacccgccttggctgtgctgcccatctactcccag
ctgccttctgacctccaggctaaaatcttccagaaggctccagatggcgttcggaagtgt
attgttgccaccaacattgctgagacatccctgactgtcgatggcatcatgtttgttatt
gactctggttattgcaaattaaaggtcttcaatcctaggattggcatggatgctctgcag
atctacccgatcagccaggccaatgccaaccagaggtcggggcgagccggcaggacgggc
ccaggtcagtgtttcaggctgtacacccagagtgcctataagaatgagctcctgaccact
acagtgcccgagatccagaggaccaacctggccaacgtggtgctgctgctcaagtccctt
ggggtgcaggacctgctgcagttccacttcatggacccgcccccggaggacaacatgctc
aactccatgtatcagctctggatccttggggccctggacaacacaggcggtctgacctcg
actgggcggctgatggtggagttcccgttggacccagccctgtccaagatgctcattgtg
tcctgtgacatgggctgcagctctgagatcctgctcattgtctccatgctctccgtccca
gccatcttctacaggcccaaggggcgagaggaggagagtgatcaaatccgggagaagttt
gctgtccccgagagtgatcatttgacctacctgaatgtctacctgcagtggaagaataat
aattactctaccatctggtgtaatgatcatttcatccatgccaaagccatgcggaaggtc
cgggaggtgcgggctcagctcaaggacatcatggtgcagcagcggatgagcctggcctca
tgtggcaccgactgggacattgttaggaagtgtatctgtgctgcctatttccatcaggca
gccaagctcaagggaatcggagagtatgtgaatatccggacagggatgccctgccacttg
caccccaccagctccctctttggaatgggctacaccccagactacatagtgtatcatgag
ttggtcatgaccaccaaggagtacatgcagtgtgtgaccgctgtggacggggagtggctg
gcggagctgggccccatgttctacagcgtgaaacaggcaggaaagtctcggcaggagaac
cgccgacgggccaaagaggaggcctctgccatggaggaggagatggcgctggctgaggag
cagctgcgagcccggcggcaggagcaggaaaagcgcagccccctgggcagtgtcaggtct
acgaagatctacactccaggtcggaaagagcaaggggaacccatgacccctcgccgcacg
ccagcccgctttgggctgtga
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integrated database retrieval system
