Equus przewalskii (Przewalski's horse): 103552020
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Entry
103552020 CDS
T04644
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103552020 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103552020 (SMG7)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103552020 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
103552020 (SMG7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
103552020
NCBI-ProteinID:
XP_070447089
UniProt:
A0ABM4M316
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All DBs
Position
23:16698610..16783162
Genome browser
AA seq
1216 aa
AA seq
DB search
MRNWMFLQIVIVGENVSFKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWSVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNVTPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPGEAKENLILQETSV
IESLAADGNPGLKSVLSTGRSLSNSCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVRR
DCSKGVTVTKNDGKKDNTKRKTDTKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARK
TPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPAGNQVQAGKQSHVPYSQQRPSGPGPMNQGPQPPQPPSQQPLTSLPAQP
TAQSTSQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYW
DSSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQ
ERYPNNSVFNEVYGKNLTTSSKAELNPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYL
SATSSSESSWHQASTPSGTWTSHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGTMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcc
cagatgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaggtctggacg
tccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaatctt
tctctgttcctagaggcagctagtggcttctacactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtgaagtcttcccagttgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccgcagtctagctcctgttcctatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaatcagaccagccaggca
gagtcctactataggcatgcagctcagcttgtcccctctaatggtcagccttacaaccag
ttggctatcttagcttcttccaaaggagaccacctgaccacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctccactaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaaaaccaaatggagtgtttctgacttcatcaag
gcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaaattggaagaacagtttaagaggctgctattccaaaaagctttcaactct
cagcagttagttcatgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgagacggaacagcatagttacagccaagatgaacagctgtgttggacacagttg
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaacaagtct
caggaagagtcctacaatgcctatccccttcctgcagtcaaggtctccatggactggctg
agactcagacccagagtctttcaggaggcagtggtggatgaaagacagtacatttggccc
tggctaatttctcttctaaatagttttcatccccatgaagaggatctttcaagtactaat
gttacaccacttccagaggagtttgagttacaaggattcttggctttgagaccttctttc
aggaacttggatttttccaaaggccaccagggtattacaggagacaaagagggtcagcaa
cgacaaatacgacagcagcgcttgatctctataggcaagtggatcgccgataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagag
ttaatactggaagatcccggtgaagccaaagagaacctcattctgcaagaaacatccgtg
atagagtcactggctgcggatgggaacccagggctgaagtcagtgctgtctacaggccga
agtctaagcaacagctgtgacacaggagagaaaccagtggtcaccttcaaagagaacatt
aagccacgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactgtagcaaaggagtaactgtaactaagaatgatggcaagaaggacaacaccaagagg
aaaacagacaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagaatgtg
gcagtgcaggtgaaatcccagacagaactaagaaagacccccgtttctgaagccaggaaa
acacctgtaactcaaaccccaagtcaagcaagtaactcccagttcatccccattcatcac
cctggagccttccctcctcttcccagccggccagggttcccgcccccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacgttccttacagccagcaacggccctctggaccagggccaatgaaccag
ggacctcaaccaccacagccaccttcccagcaaccccttacatctttaccagctcagcca
acagcacagtctacaagccagttgcaggttcaagccctagctcagcaacagcaatcccct
acaaaagccgtgccagctttggggaaaagccctcctcaccactctggattccagcagtat
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattaggg
aaaatcatgcctgtgaaacagccctactaccttcagacccaagaccccataaaactgttt
gagccgtcattgcaacctcctgtaatgcagcagcagcctctagagaaaaaaatgaagcct
tttcccatggagccatataaccataatccctcagaagtcaaggtcccagaattctactgg
gattcttcctacagcatggctgataacagagctgtaatggcacagcaagcaaatatggac
cgcaggggcaaacgatcaccaggagtcttccgtccagagcaggatcctgtgcccaggatg
ccatttgaggaccccaagggctcccctctgcttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctg
ctggggcctctcgcctctcttcctggacgaagcctctttaaatccttattggagaagccc
tcggagctcatgtcacattcatcttctttcctgtccctcaccggattctctctcaatcag
gaaagatacccaaataacagtgtgttcaatgaggtatatgggaaaaacctgacaaccagc
tccaaagcagaacttaatccctcgatggccccccaggaaacatcactgtactctcttttt
gaagggactccgtggtctccatcacttcctgccagttcagatcattcaacaccagccagc
caatctcctcattcctctaacccgagcagcctgccaagctcccctccaacacacaaccat
aattctgttccattctccaattttggacccatcgggactccagataacagagataggaga
actgcagatcggtggaaaactgacaagccagccatgggtggatttggcattgattatctc
tcagcaacgtcatcctctgagagcagttggcatcaggccagcactccaagtggcacctgg
acaagccatggcccctccatggaggattcctctgctgtcctcatggaaagcctaaagtct
atctggtccagttccatgatgcatcctggaccttccgctctggagcagctgttaatgcag
cagaagcagaaacagcagcggggacaaggcaccatgaaccctccacactga
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integrated database retrieval system
