Equus przewalskii (Przewalski's horse): 103557189
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Entry
103557189 CDS
T04644
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103557189 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epz03041
]
103557189 (PRPF40A)
Spliceosome [BR:
epz03041
]
Complex A
U1 snRNP components
U1 related factors
103557189 (PRPF40A)
Complex B
103557189 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
103557189
NCBI-ProteinID:
XP_008527814
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All DBs
Position
17:complement(34146954..34201486)
Genome browser
AA seq
1036 aa
AA seq
DB search
MQATPSEAEAGGESPQSCESAAPSDWTAGKPVSLLAPLVPPRSAGQPLTFGPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESHPPSQGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTASGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSAAPVPTTEIPTTMSTMAAAEAAAAVV
AAAAAAAAAAAAANASASTSASNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQ
LTSTPAVQDPSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFK
ELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYK
EAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKE
QAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICF
EEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTIS
SDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVA
IISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPI
ELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKH
HRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRH
KSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGE
LEKRRRTLLEQLDDDQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagcgaggctgaggctggcggcgaatcgccgcagagctgcgagtcg
gcagcgccctctgattggacagcggggaagcctgtcagcttattggccccgttggtcccg
ccccgtagcgcagggcagcctttaacctttggccccagcgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatg
aggccggggacgggagccgagcgtggaggcctcatggtgagtgaaatggagagccatcct
ccctcgcagggtcccggggacggggagcggagactgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggcatg
cattatgccccaatgggaatgcaccctatgggtcagagagcaaatatgcctcctgtacct
catggaatgatgccgcaaatgatgccccctatgggagggcctccaatgggacaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtggcagcaggtacagcatctggt
gcaaagtcaatgtggactgaacataaatcacctgatggaaggacttactactacaatact
gaaacaaaacagtctacttgggagaaaccagatgatcttaaaacacctgctgagcaactt
ttgtctaaatgcccctggaaggagtacaaatctgactctggaaaaccttattattataat
tctcaaacaaaagaatctcgctgggccaaacctaaagaacttgaggatcttgaaggatac
cagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaagcagtaagcaagaagagtgcaccacaacttcagcagccccagttcctaca
acagaaattccgaccacaatgagcaccatggctgctgcagaagcagcagctgctgttgtt
gcagcagcagccgccgccgcagcagccgccgctgcagccaatgccagtgcttccacctct
gcttctaatactgttggtggaactgttccagttgttcctgagcctgaagttacttcaatt
gttgctactgttgtagataatgaaaatacagtaacaatttcaactgaagaacaagcacaa
cttactagtacccctgctgttcaggatccaagtgttgaagtatccagcaatacgggagaa
gaaacatctaagcaggaaactgtagctgattttactcccaaaaaagaagaggaggaaagc
caaccagcaaagaaaacgtacacttggaatacaaaggaggaggcaaagcaagcatttaaa
gaattattgaaagaaaagcgggtaccatccaacgcttcatgggagcaagctatgaaaatg
atcattaatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggccttt
aatgcttataaagtccagacagagaaagaagaaaaagaagaagcaagatcaaaatacaaa
gaggctaaggaatcctttcagcgttttcttgaaaaccatgagaaaatgacttccacaacc
agatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcggaa
cgtgatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggaa
caagcaaagcagttgcgaaagagaaattgggaagccttaaaaaacatccttgacaacatg
gctaacgtaacatactctactacttggtctgaagcccagcagtatctgatggataatcca
acttttgcagaagatgaggaactacagaacatggataaagaagatgcattaatttgcttt
gaagaacacattcgggctttagaaaaggaggaagaagaagaaaaacagaagagtttgctg
agagaaaggagacgacagcgtaaaaatagagaatcttttcagatatttttagatgaactg
catgaacatggacaactgcattctatgtcgtcttggatggaattgtatccaacaattagt
tctgacattagattcactaatatgcttggtcagccgggatcaactgcacttgaccttttc
aagttttatgttgaggatcttaaagcacgttaccatgatgagaagaaaataataaaagac
attctaaaggataaaggatttgtagttgaagtaaataccacttttgaagattttgtggca
ataattagttcaactaaaagatcaaccacattagatgctggaaatattaagttggctttc
aatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggaggctcgg
aagatgaagcgaaaagaatctgcatttaagagtatgttgaaacaagctactcctccaata
gaattggatgctgtgtgggaagatatccgggagagatttgtaaaagagccagcgtttgag
gacataactctggagtctgaaagaaaacgaatatttaaagattttatgcatgtgcttgag
cacgaatgtcaacatcatcattcaaagaacaagaaacattctaaaaaatctaaaaaacat
cacaggaaacgttcccgctctcgatcggggtcagattcagatgatgacgacagccattca
aagaaaaaaaggcagcgatcagagtcccgatctgcttcagaacattcttctagtgctgag
tctgagagaagctataagaagtcaaaaaaacataagaagaaaagcaagaagaggagacat
aaatctgactctccggagtcagatgctgaacgggagaaggataaaaaagaaaaagaccgg
gaaagtgaaaaagacagaactagacaaagatcagaatcaaaacacaaatcacctaagaaa
aagactggaaaggattctggtaattgggatacttctggcagtgaactgagtgaaggagaa
ttggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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