Equus przewalskii (Przewalski's horse): 103558948
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Entry
103558948 CDS
T04644
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03008
Ribosome biogenesis in eukaryotes
epz03013
Nucleocytoplasmic transport
epz03015
mRNA surveillance pathway
epz05014
Amyotrophic lateral sclerosis
epz05164
Influenza A
epz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103558948 (NXF1)
03015 mRNA surveillance pathway
103558948 (NXF1)
03008 Ribosome biogenesis in eukaryotes
103558948 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103558948 (NXF1)
05168 Herpes simplex virus 1 infection
103558948 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103558948 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103558948 (NXF1)
03009 Ribosome biogenesis [BR:
epz03009
]
103558948 (NXF1)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103558948 (NXF1)
mRNA cycle factors
Stress granule specific factors
103558948 (NXF1)
Ribosome biogenesis [BR:
epz03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103558948 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_8
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
103558948
NCBI-ProteinID:
XP_070421300
UniProt:
A0ABM4JZC9
LinkDB
All DBs
Position
11:complement(24371814..24381925)
Genome browser
AA seq
559 aa
AA seq
DB search
MSDAQDVPRVRYNPYAARPNRRGDGWHDRDRIHITVRRDRPPQERGGAGTSQDGTAKNWF
KITIPYGRKYDKAWLLSVIQSKCSVPFTPVEFHYENTRAQFFVEDASTASALKAVNYKIL
DQENRRISIIINASVPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVA
QNIDVVLNRKSCMVATLRIIEENIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKILNLSG
NELKSERELDKVKGLKLEELWLDGNPLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPI
AFDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAIYDSGDRQRLLDAYHDGACCSLSI
PFIPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFV
VDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNAS
PEEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSA
QAFTHLKAKGEIPEVAFMK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcccaggatgttccccgagtaagatacaacccctatgctgcccgacccaac
cgtcggggtgatggttggcatgatcgcgaccgaattcatattactgtgcggagagacaga
cctcctcaagaaagaggaggggctggcaccagccaggatgggacggcaaagaactggttt
aagattacaattccttatggcagaaaatatgacaaggcgtggctcctaagtgtgattcag
agcaagtgcagtgtccctttcacccctgttgagtttcactatgaaaacacacgggcccag
tttttcgttgaggatgccagtaccgcctctgcattgaaggctgtcaactataagattttg
gatcaggagaaccgaaggatatctatcatcatcaacgcctctgttccgccccattctgtg
cagaatgagctgaaaccagaacaagtagagcagctaaagctgatcatgagcaaacgatac
gatggctcccaacaagcacttgacctcaaaggcctccgttcagacccagatttggtggcc
cagaacattgatgttgtcctgaatcgtaaaagctgcatggtggctaccctgcgaatcatt
gaagagaacatccccgagctgttgtccctgaacttgagcaacaataagctatacaggttg
gatgacctgtccagcattgtgcagaaagcacccaacctaaagatcctaaacctctctgga
aatgagttgaagtctgagagggagttggacaaggtaaaaggcctgaagctagaagagctg
tggcttgacggaaaccccctgtgtgacaccttccgagaccagtccacttatatcagcgcc
attcgtgaacgatttcccaaattactacgtctggatggccatgagttacccccgccaatt
gcctttgatgttgaagcccccacgatgttaccaccctgcaagggaagctattttggaaca
gagaccctgaaaaatctggtcctgcacttcttgcagcagtactatgcaatttatgactct
ggagaccggcagcggctcctggatgcctatcatgatggagcctgctgctccctgagcatt
cctttcatcccccagaaccctgcccgaagcaacttggccgagtatttcaaggacagcagg
aatgtgaagaagcttaaagaccctaccctgcggttccggctgctgaaacacacacgtctc
aacgttgttgccttcctcaatgagttgcccaaaactcagcatgacgtcaattctttcgtg
gtagacataagcgctcagacaagcacgttgctgtgtttttctgtcaatggggtcttcaag
gaagtggatggaaagtctcgggattctttgcgagctttcacccggacgttcgttgctgtt
cctgccagcaattcagggctgtgcatcgtaaacgacgagctgtttgtgcggaatgccagc
cccgaggagatccaaagagcctttgccatgcctgcacccacaccttcctccagcccagtg
cccaccctctccccagagcagcaggaaatgctgcaggcattctcgacccagtctggcatg
aacctcgagtggtcccagaagtgccttcaggacaacaactgggactacaccagatctgcc
caggccttcactcatctcaaggccaagggcgagatcccagaagtggcgttcatgaagtga
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