Equus przewalskii (Przewalski's horse): 103561167
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Entry
103561167 CDS
T04644
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03013
Nucleocytoplasmic transport
epz05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103561167 (NUP88)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103561167 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103561167 (NUP88)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103561167 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
DUF7344
Motif
Other DBs
NCBI-GeneID:
103561167
NCBI-ProteinID:
XP_008533821
LinkDB
All DBs
Position
10:49093424..49122390
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AA seq
743 aa
AA seq
DB search
MAAAEGPGGDGELWQSWLPNHVVFSRLREGLKNQSQAEAEKPASSSLPSSPPPPPPLLTR
NLVLGLGGELFLWDADGSSFLVVRLRGLSGAGEESSLSQYQRLLCINPPLFEIYQVLLSP
TQHHVALIGIKGIMVLELPKRWGKNSEFEGGKSTVNCSTTPIAERFFTSSASLTLKHAAW
YPSEMLDPHVVLLTSDNVIRIYSLREPQTPTKVIVLSEAEEESLTLNKGRAYTASLGETA
VAFDFGPLAAVPKNVFGQKGKDEVVAYPLYILYENGETFLTYVSLLHSPGNIGKLLGPLP
MHPAAEDNYGYDACAILCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWDSRAD
LIPSLYVFECVELELALKLASGEDEPFDSDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGL
TWIHKLHKFLGSDEEDKDSLQELAAEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGP
TMVCVTSNYECLLRPLLSTVHPASPPLLCTREDVEVAESPLRILAETPDSFEKHIRSILQ
RSVANPAFLKSSEKDTAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQK
KKQLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKVLHSFHSRLPVLSDSE
RDMKRELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPHKPTIALSAYQRKCIQSIL
REEGEHIREMVKQINDIRNHVNF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgagggtcccggcggcgacggcgaactgtggcagagctggctccctaac
cacgtcgtgttctcgcggctgcgggaaggactgaaaaaccagagccaagccgaggctgag
aagccggcctcttcatcactgccctcatcgccgccgccgccgccgccgttgctaacgaga
aacctggtgttaggcctcggcggggagctcttcctgtgggatgcagacggcagctccttc
ttggtcgtgcgcctccggggcctcagcggcgccggagaggagtcctccctctcccagtac
cagagattgctttgcataaatccgcctctgtttgaaatctatcaagtcttgttaagtcca
acgcaacatcacgtagcacttataggaataaaaggaattatggtattagaattacctaaa
agatgggggaagaattctgaatttgaaggtggaaaatcaacagtgaattgtagcaccact
ccgattgctgagaggttcttcaccagctctgcctctctgactcttaagcacgctgcctgg
tatccgagtgaaatgctggatccccacgtggtgctgctgacgtcagacaatgtcatcaga
atttactctctacgtgagccccagacacccactaaggtcattgtactttcagaagcagaa
gaggaaagtctaacactcaataaaggaagggcatataccgcatctctaggagagacagca
gttgcatttgactttgggccattggcagcagtcccgaagaatgtatttggacaaaagggc
aaagatgaagtagtggcatacccactgtacatcttatatgagaatggggagactttcctt
acgtatgttagtctgttacacagccctgggaatattggaaagctcttaggtccactgccc
atgcatcctgcagctgaagataactatggttacgatgcttgtgctatactctgcttgccc
tgtgtccccaacatcttagtgattgctactgaatcaggaatgctgtatcactgtgttgtg
ctggaaggggaagaagaagatgaccaaacatcagaaaagtcctgggattccagggccgac
ctcattccttctctgtatgtgtttgagtgtgttgagttggagcttgccctgaaactggca
tctggagaggatgagccctttgattctgacttttcttgtccaatcaaacttcacagagat
cccaagtgtccctcgagataccactgcactcacgaagctggcgtgcatagtgttgggcta
acgtggattcataaacttcacaaatttcttggatcagatgaagaagataaggacagtttg
caggagcttgctgcggagcagaaatgctttgtggaacacatcctctgtacgaagcccttg
ccgtgcaggcagccagctccaattcgaggattctggatcgtccctgacattctggggccc
acgatggtctgcgtcaccagtaactacgaatgtctcctgaggcctttattaagcaccgtc
catccagcatctcctcctctgctctgtacccgagaggatgttgaagtggcggagtctccc
ctccgtattctggcggaaaccccggactcctttgaaaagcatattagaagcattttgcaa
cgtagtgttgcaaatccagcatttttgaaatcatctgaaaaagatacggcccctcctcct
gaagaatgtcttcagcttatcagcagagccacccaggtgttccgagaacagtacatcctt
aaacaggacctggcaaaggaggagatccagcggagggtcaaattattatgtgaccaaaaa
aagaaacaactagaagatctcaattattgtcgagaggagaggaaaagtctacgggaaatg
gctgagcgcttagctgacaaatatgaggaagccaaggaaaagcaagaagatatcatgaac
aggatgaaaaaggtgcttcacagtttccactcccggctcccagttctctctgacagtgag
agagacatgaagagagagttacagctgatacccgatcaacttcgacatctgggcaatgcc
atcaaacaggttactatgaaaaaagactatcaacagcgcaagatggaaaaagtactgagt
cctcacaaacccaccattgctctcagtgcctaccagcggaagtgcattcagtccatcctg
agggaggagggtgaacacatacgagaaatggtgaagcaaattaacgatatccgcaaccat
gtaaacttctga
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