KEGG   Equus przewalskii (Przewalski's horse): 103561777
Entry
103561777         CDS       T04644                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
epz  Equus przewalskii (Przewalski's horse)
Pathway
epz03013  Nucleocytoplasmic transport
epz05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:epz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103561777 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103561777 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:epz03019]
    103561777 (NDC1)
Messenger RNA biogenesis [BR:epz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103561777 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 103561777
NCBI-ProteinID: XP_008534801
LinkDB
Position
2:5522027..5571052
AA seq 776 aa
MQRRPQFLEPRWTLLRRDLLDSRGRVLGSTFPWGHVSAGQCWPVRPVQTKHRRNGLGPGP
GFAQAAFEAAPTGSSWDFPPFELRWRAGFPSPAPRRAGAAITMATAVSRPCAGGSRDILW
RVLGWRIVSSIVWSVLLLPICTTVFIILSSIDLFHPIQWLSDSFNDLYSSYVIFYLLLLS
VVIVIISIFNLEFYTVVPSVPCSRLALIGKILHPQQLVHSFIHAAMGMMMAWCAAVITRG
RYSFLVVPCTGAESLENHSAQTCLNEYHLFFLLAGAFMGYSYSLLYFINNMNYLPFPIIQ
QYKFLRFRRSLLLLVKHSCVESLFLIRNFCIVYYFLGHIPKAWISTAMDLRIDEQFHRPL
DTVSGLLNLSLLYHVWLCGVFLLMTWYSSWILFKIYATEAHLFPVQPPFAEESDECLPKV
LNSNPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQ
KLVLYQEAAATNGRVLSSSYPVESKKLNCPEETTFQTPTSNQMPRPSVPPLVRTSLFSSK
LSTPDVASPLGSPFGSGVMNRMAGIFDVNTCYGSPQSPQLVRRGPRLWTSASDQQMTELS
NPPSTTVSAEGKTVRQPSGIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILSTLLTLQEAVDKYFKLPHASSKPPRI
SGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcagcgccgcccccagtttctggagccccgctggaccctgcttcggagagaccttttg
gactccagagggcgggtcctggggtccacgttcccttgggggcacgtgtctgcagggcag
tgctggcccgtccggcctgtccagacgaagcatcgaaggaatgggttgggacctgggccg
ggctttgctcaggcagcgtttgaggcagccccaacggggtcctcctgggactttcctccc
tttgaactgcggtggcgggcgggcttcccgtcgcctgctccccgcagagcaggggctgcc
atcaccatggccacggctgtgagtcggccttgcgccggcgggtcgcgggatattctgtgg
cgcgtcttgggctggaggatagtctcaagcattgtctggtcagtgctgctgctccccatc
tgtaccacagtgtttatcatcctcagcagcattgatttatttcatcctatacagtggctg
tctgattccttcaatgatctatacagttcctatgtaatcttttaccttctgctgctgtca
gtggtaatagtaataataagtattttcaatctggaattctatacagtggtgccttccgtt
ccctgctccaggctggctctgatcgggaagatcctccatcctcagcagctcgtgcactcg
tttattcatgccgccatgggaatgatgatggcctggtgcgctgctgtgataaccaggggt
cgatacagttttcttgtggttccctgcactggtgctgagagtttagagaaccattctgca
caaacctgcttaaatgagtatcacctttttttcctactggctggagcatttatgggctat
agctatagcctcctgtattttattaacaacatgaactatcttccgtttcccatcatacag
cagtacaagttcttgcgctttaggagatctctgctcttactagttaagcatagttgtgtg
gagtcactgttcctgattagaaatttctgcattgtgtattattttcttggccatattccc
aaagcttggattagcactgctatggaccttcgcatagatgagcagtttcacaggcctctt
gacactgtgagtggcctcttgaatctctccttactctaccatgtctggttatgtggtgtc
tttctcctgatgacttggtacagctcctggatactcttcaaaatctatgccacagaggct
catctgtttcctgttcaaccaccatttgcagaagagtcagatgaatgcctcccgaaagtt
ttaaacagcaatcctcccctcatcataaagtatttggccttgcaggacctgatgttgctt
tctcagtattctccctcacgaagacaagaagttttcagccttagccaaccaggtggacac
ccccacaactggacagccatttcacgggagtgcttgaatcttttaaatgatatgactcag
aaacttgttctctaccaagaagctgctgctacgaatgggagggtgctgtcttcctcatac
ccagtggaaagtaagaaattgaattgtccagaagaaactacttttcagaccccgacatct
aaccagatgcctcggccttcagtgccaccattagttaggacatcactgttttcctcaaaa
ttatctacacctgacgttgcaagtcctcttggaagcccatttggctctggtgtaatgaat
cggatggctggaatttttgatgtgaacacctgctatgggtcacctcaaagtcctcagcta
gtaagaagagggccaagattatggacttctgcttctgatcagcaaatgactgaactttct
aatcctccatctaccactgttagtgctgagggtaagacagtgagacagcccagtgggatt
tattcatggattcagaataaacgtgaacagattaagaatttcttgtcaaaacgggtgctg
ataatgtattttttcagtaagcacccagaggcctccattcaggctgttttttcggatgcc
caaatgcatatttgggcattagaaggtctgtctcacttggtagcagcatcatttacagaa
gatagatttggagtggtccagacgacactaccagctattcttagtactttgttgacgctg
caagaggcagttgacaaatacttcaagcttcctcatgcttccagtaaaccacctcggatc
tcaggaagccttgtggacacctcttacaaaacattgagatttgcatttagagcgtcacta
aaaactgccatctatcgaataactactacatttggtgaacatctcaatgctgtgcaagca
tctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag

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