Equus przewalskii (Przewalski's horse): 103561777
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Entry
103561777 CDS
T04644
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03013
Nucleocytoplasmic transport
epz05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103561777 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103561777 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103561777 (NDC1)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103561777 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
103561777
NCBI-ProteinID:
XP_008534801
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Position
2:5522027..5571052
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AA seq
776 aa
AA seq
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MQRRPQFLEPRWTLLRRDLLDSRGRVLGSTFPWGHVSAGQCWPVRPVQTKHRRNGLGPGP
GFAQAAFEAAPTGSSWDFPPFELRWRAGFPSPAPRRAGAAITMATAVSRPCAGGSRDILW
RVLGWRIVSSIVWSVLLLPICTTVFIILSSIDLFHPIQWLSDSFNDLYSSYVIFYLLLLS
VVIVIISIFNLEFYTVVPSVPCSRLALIGKILHPQQLVHSFIHAAMGMMMAWCAAVITRG
RYSFLVVPCTGAESLENHSAQTCLNEYHLFFLLAGAFMGYSYSLLYFINNMNYLPFPIIQ
QYKFLRFRRSLLLLVKHSCVESLFLIRNFCIVYYFLGHIPKAWISTAMDLRIDEQFHRPL
DTVSGLLNLSLLYHVWLCGVFLLMTWYSSWILFKIYATEAHLFPVQPPFAEESDECLPKV
LNSNPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQ
KLVLYQEAAATNGRVLSSSYPVESKKLNCPEETTFQTPTSNQMPRPSVPPLVRTSLFSSK
LSTPDVASPLGSPFGSGVMNRMAGIFDVNTCYGSPQSPQLVRRGPRLWTSASDQQMTELS
NPPSTTVSAEGKTVRQPSGIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDA
QMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILSTLLTLQEAVDKYFKLPHASSKPPRI
SGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccgcccccagtttctggagccccgctggaccctgcttcggagagaccttttg
gactccagagggcgggtcctggggtccacgttcccttgggggcacgtgtctgcagggcag
tgctggcccgtccggcctgtccagacgaagcatcgaaggaatgggttgggacctgggccg
ggctttgctcaggcagcgtttgaggcagccccaacggggtcctcctgggactttcctccc
tttgaactgcggtggcgggcgggcttcccgtcgcctgctccccgcagagcaggggctgcc
atcaccatggccacggctgtgagtcggccttgcgccggcgggtcgcgggatattctgtgg
cgcgtcttgggctggaggatagtctcaagcattgtctggtcagtgctgctgctccccatc
tgtaccacagtgtttatcatcctcagcagcattgatttatttcatcctatacagtggctg
tctgattccttcaatgatctatacagttcctatgtaatcttttaccttctgctgctgtca
gtggtaatagtaataataagtattttcaatctggaattctatacagtggtgccttccgtt
ccctgctccaggctggctctgatcgggaagatcctccatcctcagcagctcgtgcactcg
tttattcatgccgccatgggaatgatgatggcctggtgcgctgctgtgataaccaggggt
cgatacagttttcttgtggttccctgcactggtgctgagagtttagagaaccattctgca
caaacctgcttaaatgagtatcacctttttttcctactggctggagcatttatgggctat
agctatagcctcctgtattttattaacaacatgaactatcttccgtttcccatcatacag
cagtacaagttcttgcgctttaggagatctctgctcttactagttaagcatagttgtgtg
gagtcactgttcctgattagaaatttctgcattgtgtattattttcttggccatattccc
aaagcttggattagcactgctatggaccttcgcatagatgagcagtttcacaggcctctt
gacactgtgagtggcctcttgaatctctccttactctaccatgtctggttatgtggtgtc
tttctcctgatgacttggtacagctcctggatactcttcaaaatctatgccacagaggct
catctgtttcctgttcaaccaccatttgcagaagagtcagatgaatgcctcccgaaagtt
ttaaacagcaatcctcccctcatcataaagtatttggccttgcaggacctgatgttgctt
tctcagtattctccctcacgaagacaagaagttttcagccttagccaaccaggtggacac
ccccacaactggacagccatttcacgggagtgcttgaatcttttaaatgatatgactcag
aaacttgttctctaccaagaagctgctgctacgaatgggagggtgctgtcttcctcatac
ccagtggaaagtaagaaattgaattgtccagaagaaactacttttcagaccccgacatct
aaccagatgcctcggccttcagtgccaccattagttaggacatcactgttttcctcaaaa
ttatctacacctgacgttgcaagtcctcttggaagcccatttggctctggtgtaatgaat
cggatggctggaatttttgatgtgaacacctgctatgggtcacctcaaagtcctcagcta
gtaagaagagggccaagattatggacttctgcttctgatcagcaaatgactgaactttct
aatcctccatctaccactgttagtgctgagggtaagacagtgagacagcccagtgggatt
tattcatggattcagaataaacgtgaacagattaagaatttcttgtcaaaacgggtgctg
ataatgtattttttcagtaagcacccagaggcctccattcaggctgttttttcggatgcc
caaatgcatatttgggcattagaaggtctgtctcacttggtagcagcatcatttacagaa
gatagatttggagtggtccagacgacactaccagctattcttagtactttgttgacgctg
caagaggcagttgacaaatacttcaagcttcctcatgcttccagtaaaccacctcggatc
tcaggaagccttgtggacacctcttacaaaacattgagatttgcatttagagcgtcacta
aaaactgccatctatcgaataactactacatttggtgaacatctcaatgctgtgcaagca
tctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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