Equus przewalskii (Przewalski's horse): 103562464
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Entry
103562464 CDS
T04644
Symbol
DDX39B
Name
(RefSeq) spliceosome RNA helicase DDX39B
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03013
Nucleocytoplasmic transport
epz03015
mRNA surveillance pathway
epz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103562464 (DDX39B)
09122 Translation
03013 Nucleocytoplasmic transport
103562464 (DDX39B)
03015 mRNA surveillance pathway
103562464 (DDX39B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103562464 (DDX39B)
03041 Spliceosome [BR:
epz03041
]
103562464 (DDX39B)
Enzymes [BR:
epz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103562464 (DDX39B)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103562464 (DDX39B)
Spliceosome [BR:
epz03041
]
Complex C
Other components
EJC/TREX
103562464 (DDX39B)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103562464 (DDX39B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103562464
NCBI-ProteinID:
XP_070441788
UniProt:
A0ABM4LMX9
LinkDB
All DBs
Position
19:complement(31759832..31771628)
Genome browser
AA seq
428 aa
AA seq
DB search
MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI
VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC
HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA
RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR
KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF
NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI
SSYIEQTR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacgatgtggacaatgagctcttggactatgaagatgatgaggtggagaca
gcagctgggggagatggagctgaggcccctgccaagaaggatgtcaagggctcctatgtc
tccatccacagctctggttttcgtgacttcctgctcaagccagagttgctccgggccatt
gttgactgtggctttgagcatccttcagaagtccagcatgagtgtatccctcaggccatt
ctgggaatggatgtcctatgccaggccaagtcaggcatgggaaagacagcagtgtttgtg
ctggccacactgcaacagctggaaccagttaccgggcaggtgtctgtgctggtgatgtgt
cacactcgggagttggcttttcagatcagcaaggagtatgagcgcttctctaagtacatg
cccaatgtcaaggtcgcagtgttttttggtggtctgtctatcaagaaggatgaagaggtg
ctgaagaagaactgcccacatattgttgtggggacccctggccgcatcctagccctggct
cgaaataagagcctcaacctcaaacacattaaacactttatcttggatgaatgtgataag
atgcttgaacagctcgacatgcgtcgggatgtccaggaaatttttcgcatgaccccccat
gagaagcaggtcatgatgttcagtgctaccttgagcaaagagatccgtccagtctgccgc
aagttcatgcaagacccaatggagatcttcgtggatgatgagacgaagctgacgctgcat
gggttgcagcagtactacgtgaaactgaaggacaacgagaagaaccggaagctctttgac
cttctggatgtccttgagttcaaccaggtggtgatctttgtgaagtctgtgcagcgttgc
attgccctggcccagctcttggtggagcagaacttcccagccattgccatccaccgaggg
atgccccaggaggagaggctttctcggtatcagcagtttaaagattttcaacgacgaatt
cttgtggctaccaacctattcggccgaggcatggacatcgagcgggtgaacattgccttt
aactacgacatgcctgaggattctgacacctatctgcatcgggtggccagagcaggccgt
tttggcaccaaaggcttggccatcacatttgtgtcagatgagaatgatgccaagatactc
aatgatgtgcaggatcgctttgaggtcaatattagtgagctgcctgatgagatagacatc
tcctcctacattgaacagacgcggtag
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integrated database retrieval system
