Equus przewalskii (Przewalski's horse): 103564926
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Entry
103564926 CDS
T04644
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X3
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103564926 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epz03019
]
103564926 (PATL1)
Messenger RNA biogenesis [BR:
epz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103564926 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
103564926 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
103564926
NCBI-ProteinID:
XP_008539081
UniProt:
A0ABM2FHC1
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Position
11:complement(21103753..21132708)
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AA seq
793 aa
AA seq
DB search
MSGKLGDRKNAIFTRSHNEAILLIGKSLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGS
GAVDDDWQEAHERLAELEEKLPAAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENEL
EDPAIMTAVQTRPVLQPQPGSLNSSIWDGSEVLRRIRGPLLAQEMPAVSVLEYALPQRTP
QAPEDDRDLSERALPRRSTSPVIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPP
MPPRYPAPYGERMSPNQLCSVPNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSP
SQFARVPGFVGSPLAAAMNPKLLQGRVGQMLPPAPGFRAFFSAPPPATPPPPQQHPPGPG
PHLQNLRSQAPMFRPDTTHLHPQHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHHDHLR
KDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKE
RTKLITPQVAKLEHTYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRD
KRRKTLVIIEKTYSLLLDVEDYERRYLLSLEEERPALMEERKHKICSMYDNLRGKLPGQE
RPSDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMTTARSLPFLIKKDAQDEVLPCLL
SPFSLLVYHLPSVTVTSLLQQLMNLPQSAAAPAPSNPHLTAVLQNKFGLSLLLVVLSRGE
DLQSSDPAAESTQNNQWTEVMFTATQELLRIPQAALAKPLSIPTNLVSLFSRYVDRQKLN
LLETKLQLVQGIR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggaaattgggggatagaaaaaatgccatctttacaagaagtcataatgaagct
attctgttaattgggaagtctttggaggattgtcctctggatgaagatgaagatgcattt
cagggcctgggagaggaagatgaagagattgatcaatttaatgatgatacatttgggtca
ggtgcagttgatgatgattggcaggaagcacatgagcgcctggctgaactggaagagaag
ctcccagcggccgttaatgaacaaacaggcaatggagaaagggatgagatggacttgttg
ggtgaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaacta
gaagatccagctatcatgacggctgtgcagaccaggccagttttgcaaccccaaccagga
agtctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccgctg
cttgctcaggaaatgcctgcagtgtctgtattagaatatgccttgcctcagaggacccca
caggcccctgaagacgatcgggacctttctgagcgtgcattaccacggcggtcaacgtca
cctgtcattgggagtcctcctgttagagctgtccccataggcaccccacccaagcagatg
gctgtacccagcttcaaccagcagattctgtgcccgaaacctgtccatgttcggccccca
atgccaccgcgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcagt
gtcccgaactcttccctactgggtcaccctttccctcctagtgttcctcctgttctcagc
cccctccagagagcacagcttcttggaggagcacagctgcagcctggacggatgtctccc
agccagtttgcacgggtccctggatttgttggcagtccacttgctgctgccatgaatccc
aagttgctgcaagggcgagttgggcagatgcttccccccgcaccaggcttccgtgccttc
tttagtgctccaccccccgctaccccacctcctccacagcagcacccccctggcccagga
cctcacctgcaaaacctaagatctcaggccccaatgtttagaccagacacaactcacctt
catccacagcaccgtcgactcttgcatcagagacaacagcagaacagaaatcagcatcgg
aacctcaatggtgcgggagatagaggaagtcaccggagcagtcatcacgatcatctccgg
aaggatccatatgccaatctcatgttgcagcgagaaaaggattgggtctctaaaatccag
atgatgcagctgcaaagcactgatccctacctggatgatttttattaccagaattacttt
gaaaaactggagaaactgtcagctgctgaagaagtgcaaggtgatggccctaaaaaggag
cgcaccaagctcattacccctcaggtggccaaactggagcacacctataagccagtgcag
tttgagggctctttgggaaagctgactgtctccagtgtgaataatccccgaaaaatgatt
gatgctgttgtgacatctcggagtgaagatgatgagacaaaggaaaaacaggttcgggac
aagagacgaaaaacccttgtcataattgagaaaacctatagtttactcctggatgtggag
gattatgaaaggcggtatctcctaagtctagaagaagagcgaccagccctgatggaagaa
agaaaacacaaaatttgcagcatgtatgacaacttaagggggaaattgcccggtcaagag
aggccaagtgatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggtt
gcccgcattcttcctttcctctccacagagcaagcagctgacattctcatgacaacagct
aggagcctccctttcctcatcaagaaggatgcacaagatgaggtgctgccatgcttactg
agtcccttctctctcctcgtctatcatcttccatcagtgactgtcaccagccttctgcaa
cagctgatgaacctacctcagagcgcagctgcaccagcaccctctaatccccacctcact
gctgtgctccagaacaagtttggcctgtcactgctcctcgtcgtgctgagccgtggggaa
gacctacagagttcagaccctgctgcagaatcaacgcaaaacaaccagtggacggaggtg
atgttcacagcaacccaagaacttctgcgcatcccccaggcagccctggccaagccactc
tctatacccacaaacctagtatccctcttttctcgctatgttgaccgacagaaactgaac
ttgctggagacaaaactgcagctagttcaggggatacgataa
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