Equus przewalskii (Przewalski's horse): 103565225
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Entry
103565225 CDS
T04644
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103565225 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epz03021
]
103565225 (SETX)
Enzymes [BR:
epz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103565225 (SETX)
5.6.2.5 RNA 5'-3' helicase
103565225 (SETX)
Transcription machinery [BR:
epz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103565225 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
UvrD-helicase
AAA_30
AAA_22
ResIII
AAA_16
NAT10_TcmA_helicase
nSTAND3
UvrD_C_2
TniB
Motif
Other DBs
NCBI-GeneID:
103565225
NCBI-ProteinID:
XP_070451480
UniProt:
A0ABM4MFL2
LinkDB
All DBs
Position
26:complement(34571162..34650375)
Genome browser
AA seq
2736 aa
AA seq
DB search
MQILTRLPVRPRISTEKISSCRLLAQSLDVFFSGNRYRMSTCCWCTPGGISTIDFLKRYA
SRTHSREFQTADEDLCYCLECVAEYHKARDELPFLHEVLWELETLRLINHFEKSMKAEIG
DDDELYIVDNNGEAQLFDFTGQDFENKLRVPLLEILKYPYLLLHERVNELCVEALCRMEQ
ANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGKVDRDDYYDLQEVLTCLFKVIEL
GLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKNYWLGICMLLTILEEQAMDSLLLGSDK
QNDFMQSILHTMERPSDDDSVDPFWPALHCFMVILDRLGSKVWGQLIDPIEAFQTIINNV
SYNREIQNIRNSSVRTKIEPESYLDDMVTCSQIVYNYNPEKTKKDSGWRSAICPDYCPNM
YEEMETLSSLLQSDIGQDMRVHNSTFLWFIPFVQSLMDLKDLGVAYIVEVIHHLHSEVKD
VLNQADAVCDKVSEFFLLILVSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTSAFAR
SSEKSSGNCSKGTSMMSSLSLHSLPSNSVQLACVQLIRSLLKEGYQLGQQTLCKRFWDKL
NLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKVKPPPCNTLVDLTPACKTPPASYTKE
ENEQIGKKSKKDIRCLENSSPTFSKEPMKADAYQVQESLLIKASNTVEDNEQNYIKDIKL
EDHLSTESCLKQSSKNLVNERAQDEVKISTRKQKSVKENSLHKRQNCTSRNGPEKGCDRG
IIISTRLLTDSSTDFLEKVSTSNEDFPLKDDAVSKTSKAKAKSQKDEICAKLSHVIKKQH
RKSTLVNNAVNLEENRTVSNVENLFSRKDIGGQKGDSFVHNLSLDPNGILDDKNGEQKSQ
SSLLLKKKQLKNEELDIFSSHEKSCQIQECHADDKDLVSFTEMTNTFMKKTSPFKDPMTV
IESREKEISKSTDQVSSNLREQAPSISPNSDTLTDSQIDRDLHKLSLIAQASVIKFPSDS
AQRNSSQLQRKVRDDKRCFTANQNKVGETCHEQVIIISDSDDDDDGDERILRFEKHTKQD
KICVEKECPEQHIAVDNRNVEKKLIKEEETQSLLQFEESDSQFFEFESPCEVFSVWQDQK
PDNKNSVQEDGKNSSLTHIVDITNDWGYDTDYVSEEVIKKVSEGIEEHAEPQSTSISVEE
FCEIEVKKPKRKQIEKPMAEDPLRPSSISKEVQPDILNEKGLTENNFKSIDIKTTTPNSS
IQRATTISLKKSSPKPHAYSKPVRKVPLSKTPKKTHSDAKKGQNKNSNYLSCRTAPAVVP
PKKFRQCPEPTSKVEKLGLKKAPRRAFELSQRSLEHIGKLRDHGKTVGVVDTPKKTKLIS
QTSVKNNKKLLKNQDLQLQRQMRSRSQQNKQRCFDYESTDTMKTRSRTAQNSDIFVPESA
RSDNKGGTEAIADSDGRQLIKCASSELEPVKTKYVSQGTDDTCLLNQCNSVVLNGRIPTN
EIIVSTSEEPLGGSDLTAHHLELAILKEQEPESNSDIEEDNIFLTQRDPEDMDLCSQMEN
GNDKLIEVVHGKDTVQVEDDSVRQPQLESLSSTKCKYKDCVETMKNEGEYCLKHSEVKAA
DEDVFRKPSLPLSSSKPWRPTTKIFSSRSTSRIAHLSKSLENTSALPPALKNKSNGVQSI
LKAPQPASLVSQKPMGEVKSLCNVPHSQTLNNSNRQGYKLPFGENKSFLASSPVSILLSS
QSVSDTFVKEVLKWKYEMFVNFDQCGPPASLCQSISRPVPVKFQDCGEYFNVFLPLMILN
TFETWFPRTCSIYLPLIQDQFQVAQEWISSPNKEKFCQLHLRKFPADYKKYWEFVVYLEE
CELAKQLHPKENDLVFLVPERLNGEKKAIERNCMQDPHEYHCGYVHKFRRTSVMRNGKSE
YSLSIQTQDNLPVNLNELVKCIVISSLVTTQRKLKAMSLLSGRNQLARAVLNPNPMDFCT
KDLLTTTSDRIIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGL
LYRLLTENHRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLG
NCGDINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHVQDMHRRKEYLDHQLDELSR
QRALCRGGREVQRQELDEKIASVSKERQELASKIKEVQGRPQKTQNNIILESHVICCTLS
TSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVI
SMKAQDYGYDQSMMARFYKLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNKS
LKTNRLTETSRCSSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEIIKLIKDKRRD
VTFRNIGIITHYKAQKTMIQKDLDKEFDGKGPAEVDTVDAFQGRQKDCVIVTCVRANATQ
GSIGFLASLQRLNVTITRAKYSLFILGHLRTLMDNEHWNELIQDAQKRGAIIKTCDKNYK
HDAMKILKLKPVLQRSLTHPSAVAPEVSRPQGGLPSNKLDSEFAKTSFASSLYHTPSDSK
ETTVTAKDPERPSGQDWLRDPRLLRRMGMSPEAKGKCLMDPQSLSPQHPGATPPSGEPGF
PVIHQDVGSVQQSAAKGATLSNHKPHVQCDPPAASGDAATSRRKCDQEGMLSYRRETRAF
SEGDQEKYSSVSHHTKRNSGWDKEEEDSSSKKRKVL
NT seq
8211 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcctcacacgtttaccagtaagaccaagaatctcgactgagaagatctcctct
tgtaggttgttagcccagtctttagatgtcttcttttctggaaataggtacagaatgagc
acatgttgttggtgtacgcctggtggtatttccaccattgacttcctaaagcgctatgca
tccaggacccactccagggaatttcaaacagctgatgaagacctctgttactgcttagag
tgtgtggccgaataccataaagcaagggatgaattgccattcttgcatgaggttttatgg
gaattagaaaccttacgtctcataaatcactttgaaaaatccatgaaagcagaaattgga
gatgatgatgaattgtatatagtagacaacaatggagaggcacaactgtttgactttact
ggccaagactttgaaaataagcttcgagttcctcttcttgaaatactgaaatatccttat
ctgcttttacatgagcgtgttaatgaattatgtgttgaagcactttgtcggatggaacaa
gctaattgctcctttcaggtttttgacaagcatccagggatctatttgtttttggtccat
cccaatgaaatggttcggcgttgggctatcctgaccgcaagaaacttggggaaagtggac
agagatgattattatgacttacaggaggttttgacttgcctttttaaagtcattgaattg
gggcttttagaaagtccagacatttatacttcttctgtccttgaaaagggcaaactgatt
cttctgccctcgcacatgtatgatactaccaactataaaaactattggttaggtatttgc
atgttgctgaccattcttgaggagcaagccatggattcactgttgttgggctcagacaaa
caaaatgactttatgcaatcaatacttcacaccatggagaggccatcagatgatgatagt
gtggatcctttctggccagcattacactgtttcatggtgattctggatcgccttggatct
aaggtctggggtcaacttattgatcctattgaagcatttcaaactattatcaataatgtg
agctacaatagagagattcaaaatatacggaacagctctgtaaggaccaagatagaaccg
gagtcatatttggatgacatggtgacttgcagccagattgtatacaattataatcctgaa
aagaccaaaaaggattcagggtggagatcagccatttgcccagattattgtcctaacatg
tatgaagaaatggaaacattatccagtttgcttcagtcagatattggtcaagacatgcgt
gttcataacagcacatttctgtggttcatcccttttgttcaatccctcatggatcttaag
gatttgggtgtggcttatatagtagaggttattcatcatctgcactctgaagtcaaagat
gtcctcaaccaagcagatgctgtgtgtgacaaagtcagtgaattttttcttctaattttg
gtgtcagtgattgaactgcatagaaataaaaaatgtttgcatttgctgtgggttagttcc
caacaatgggttgaagccgttgtaaaatgtgccaaacttccaaccagtgcatttgcacgg
agttctgagaaatcatctggaaattgctccaaaggaacatcaatgatgtcatctctgtca
ttgcattcactgccatctaactctgtacaacttgcgtgtgtgcaactgattagaagtctc
cttaaagaaggttatcagcttgggcagcaaactctttgtaagcgattctgggataagctc
aatttattcctgcgaggaaatctatctctaggttggcagctgactagtcaggaaacccat
gagttacaaacttgtttaaagcaaattattcgaaacataaaagtcaaaccacctccttgt
aacactttggtggatctgactcctgcgtgtaaaacccctcctgcatcttatactaaagag
gaaaatgaacaaataggaaagaagtctaaaaaagacatacgctgtctggaaaattccagc
ccaacgttttctaaagaaccaatgaaagctgatgcatatcaagtgcaggagagtctattg
atcaaagcaagtaacactgtagaggataatgagcaaaattatataaaagacatcaaacta
gaagaccatctttcaactgagtcatgtttaaagcagagtagtaaaaatcttgtcaatgaa
agagctcaagatgaagttaaaataagtacaaggaagcagaagtctgtgaaagagaattcc
ttacataaacgacagaattgtacttcaagaaatggtccagaaaaagggtgtgacagagga
ataataatatcaacacgtttgttgactgattctagcactgattttctggaaaaggtatcc
acatcaaatgaagatttccctttaaaggatgatgctgtcagtaaaacctcaaaagcaaaa
gctaagtcacagaaagatgaaatctgtgctaagttatcacatgtgataaagaagcaacac
aggaaaagtactttggtcaataatgctgtcaatttagaggaaaaccggactgtatctaac
gttgagaatttgttttcaaggaaagatataggaggtcagaaaggggatagctttgtacac
aatctctctttagaccctaatggtattctggatgataaaaatggagagcaaaaatctcaa
agcagtttactactgaaaaagaaacaattaaagaatgaagagttagatattttctcttcc
catgaaaagagttgtcaaatacaagaatgtcatgctgatgataaagatttggtctctttt
acagaaatgactaatactttcatgaagaaaacatctccctttaaagatcccatgactgta
attgaatcaagagagaaggaaattagcaagagtaccgatcaggtttcttctaatttgaga
gaacaggcccctagcatcagtcctaattctgacactttaacagattctcagatagaccga
gacctccacaaattgtctttaatagctcaggctagcgttattaagtttccatcagattca
gcgcaaagaaactcatcccagctacaaagaaaagtaagagatgataagagatgtttcaca
gctaaccaaaacaaagttggagaaacctgccatgaacaggtgattattatttcagattct
gatgatgatgatgatggtgatgaaagaattctgcgttttgagaaacacactaaacaagat
aaaatatgtgttgagaaagaatgtccagagcagcatattgcagtagataatagaaatgtg
gaaaagaagctaataaaagaagaagagacacagtcccttttacagtttgaggaatctgat
tctcagttttttgagtttgaaagtccatgtgaagtgttttcagtttggcaagatcagaaa
ccagacaacaagaattcagttcaagaggatggaaaaaattcatccttgactcatatagtt
gatatcacaaatgattggggttatgatacagattatgtatctgaagaggttattaaaaaa
gtatcagagggcattgaagaacacgcagaaccacagagtactagtatttctgttgaggaa
ttttgtgaaattgaagtaaaaaaacctaagagaaaacaaattgaaaaacctatggctgaa
gaccctttaaggccttcatctatcagcaaggaggtccagcctgatattcttaatgagaaa
ggtctgactgaaaataattttaaaagtattgacataaagactacaactcccaattcaagt
attcagagagccaccacgatttccctaaagaaatcttctccgaagcctcatgcttattcc
aaacccgttaggaaagtcccactttctaaaacccctaagaaaacacattcagatgccaaa
aaaggacagaataaaaattcaaattacttaagttgtaggacagctcctgctgtagtgcca
ccaaagaaatttcgccagtgtcctgaaccaacttcaaaagttgagaaacttggtctgaaa
aaggctcctcgtagggcatttgagttgtctcagcggtctttagagcatataggtaagtta
cgtgaccatggcaaaactgttggagtagttgataccccaaagaagactaaattaatttct
cagacttctgtcaaaaataataagaaattgctgaaaaatcaagatctgcagttgcaaagg
cagatgagatccagatcacaacaaaataaacaaagatgttttgattatgaaagtacagat
actatgaaaacaaggtcacgcacagcgcagaattctgacatatttgtaccggaatcagct
aggtcagataataaaggaggaactgaggcaattgctgacagtgatggcaggcaattaata
aaatgtgcatcttctgaactagaacctgtgaaaacaaaatatgtttcccaggggactgat
gatacttgtcttttgaaccagtgtaattctgtagtgttaaatggaagaataccaacaaat
gaaataattgtttctacttcagaggaacctttaggtggaagtgacctaacagcacatcat
ttagagctggcaattttgaaagagcaagagcctgaatccaacagtgatatagaggaagat
aatatatttttaacacaacgtgaccctgaggatatggatttatgttcacaaatggagaat
ggtaatgataaactcattgaggtagttcatggaaaagatactgttcaggtagaagatgat
tctgtaagacagcctcagttggaatctttgagtagcacaaaatgtaagtacaaagattgt
gttgaaactatgaaaaacgagggtgagtactgcttgaaacactctgaagttaaagcagca
gatgaagatgtatttcgtaaacctagcttgcctctttcttcatctaaaccttggagacct
accactaagatttttagctcacgtagtacttcacgaattgctcatctttccaagtctttg
gaaaatacctcagcacttccaccagctctaaaaaataagtcaaatggggtacaatctatt
ttgaaagcaccacagccagcctctcttgtgtctcagaagccaatgggtgaagtcaagagt
ttgtgcaatgttcctcattctcagactctaaataattccaacagacaaggttacaaactt
ccatttggtgaaaacaagtcttttttggcttcctctccagtaagcattctcttgtcatca
cagtctgtctctgacacctttgttaaagaggtcttaaaatggaaatatgaaatgtttgtg
aactttgatcagtgtgggcccccagcaagtctttgtcagtccatctcaagacctgtgcct
gtcaaatttcaagattgtggagaatatttcaacgtttttcttcctttgatgatactgaat
acttttgaaacatggtttcctagaacttgcagtatatatttaccactaatccaagaccag
tttcaggtggcacaggaatggatcagctctccaaataaagagaaattctgtcagttacat
ttacgaaaatttcctgctgattataaaaaatactgggagtttgtggtttatcttgaagaa
tgtgaactagctaaacaacttcatccaaaggaaaatgatttggtgtttttggttcctgaa
agactaaatggagagaagaaagctatagagagaaattgcatgcaagaccctcatgaatat
cattgtggttatgttcataaatttcgccgcacttcagtcatgcgtaatgggaaatctgag
tattccctttccatccagactcaagataatttgccagtcaatttaaatgaactcgtgaaa
tgtattgtaatcagttctctggtaactacacaaaggaagttgaaagccatgtctttgctg
agtggtcggaaccaactggccagagctgttctgaatccaaaccccatggacttctgtaca
aaagatttacttactacaacatctgacagaattattgcctacctaagagatttcaatgaa
gaccaaaagaaagcgatagaaactgcatatgccatggtgaaacactccccatcagttgcc
aagatatgtctgattcatggaccacctggaacaggaaaatcaaaaactattgttggcctc
ctctatcgcctactgaccgagaaccataggaaggggcattcagatgaaaactccaatgcc
aaaatcaaacaaaaccgtgtccttgtgtgtgcaccttccaatgcagctgttgatgaactt
atgaaaaaaattatcctcgaattcaaggaaaaatgtaaagacaagaagaatcctttggga
aactgtggagatataaatttagtacgtctgggtccagagaagtctattaataatgaggtc
ctaaaattcagtttggacagccaagttaaccacagaatgaaaaaagacttaccttctcat
gttcaggacatgcatagaagaaaggaatatctggatcatcaactagatgaactttcccgc
cagcgtgctttatgccgaggtggaagggaagtacagaggcaagaattagatgaaaaaatt
gccagcgtttcaaaagaaaggcaggaacttgcttcgaaaattaaagaggttcaaggacgc
ccacaaaaaacacagaataatatcatcttagagtcccatgtcatctgctgcacattgagc
accagtggtggtttactgcttgagtctgcttttcgtgggcaaggaggtgtcccctttagt
tgtgtcattgttgatgaggctgggcagtcttgtgaagttgaaacgcttactccacttatc
catcgttgtaacaagcttatccttgtaggagatcctaaacagctccctcccacagtcatt
tctatgaaggcacaggattatggctatgaccagtcgatgatggctcgcttctacaaactg
ctggaagagaatgtagagcacaacatgatcagcagactcccgattttacagctcaccgtt
cagtacagaatgcacccagacatatgtctcttcccttctaactatgtgtataacaaaagc
ttgaaaacaaatagactaactgagaccagtcggtgttcgtcagactggccatttcaaccc
taccttgtgtttgatgtcggagatggttcagaaagacgggataatgactcatatgtaaat
gttcaagaaataaaactggtaatggaaataattaaacttattaaagacaaaagaagagat
gttactttccgaaacattggcataataacccattacaaagctcagaagacgatgattcag
aaagatttggacaaagagtttgacggaaaagggccagcagaagtagataccgtggatgcc
ttccaggggcgtcagaaagattgtgtcattgttacctgtgtcagagcaaatgccacacaa
ggctcaattggatttctggcaagtttgcagagattgaatgtcaccattacacgagccaag
tacagcctcttcatccttggtcatttgaggaccctcatggacaatgagcattggaatgaa
ctgattcaggatgctcagaagcgtggtgccattattaagacctgtgacaaaaactataaa
catgatgcaatgaagattctgaaactcaagcctgtactacagagaagtctgactcaccct
tcagctgtagccccagaggtgtccagaccccagggcggcttgcccagcaacaagctagac
agtgaatttgccaagacatcttttgcttcttccctgtaccacaccccctctgactccaag
gaaactactgttactgcaaaggaccctgaaaggccttctggtcaggactggcttcgggac
ccacgactgcttaggaggatgggcatgagccctgaagccaaagggaaatgcctaatggat
ccacagtccttgagcccgcagcatcctggagcaacacctccctcgggagagccaggcttc
cctgtaattcaccaggacgtgggcagcgtgcagcagtccgctgccaaaggagctaccctg
agcaaccacaaacctcatgtgcagtgtgatcctccagctgctagtggtgatgctgccaca
agtagaagaaaatgtgaccaggaagggatgctcagctacagaagagagaccagggctttc
agtgaaggggaccaggagaagtacagctctgtgagccatcacacaaagaggaactctggc
tgggacaaggaggaggaggacagtagttcaaagaagagaaaagttttatag
DBGET
integrated database retrieval system
