Equus przewalskii (Przewalski's horse): 103566242
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Entry
103566242 CDS
T04644
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
epz
Equus przewalskii (Przewalski's horse)
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
epz03009
]
103566242 (PDCD11)
Ribosome biogenesis [BR:
epz03009
]
Eukaryotic type
90S particles
Other 90S particles
103566242 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
OB_RRP5
HAT_Syf1_CNRKL1_C
OB_RRP5_4th
Suf
TPR_14
TPR_19
ARM_TT21
UTP6_C
TPR_CcmH_CycH
ARM_TT21_5th
TPR_15
DUF2110
DUF7017
Motif
Other DBs
NCBI-GeneID:
103566242
NCBI-ProteinID:
XP_008540795
LinkDB
All DBs
Position
1:complement(26908360..26952312)
Genome browser
AA seq
1871 aa
AA seq
DB search
MATMEESFPRGGTRKPHKSDKAFQQSVEQDNLFDISTEQESTKRKKNQKGPAKTKKLKVE
KRESSKSIREKFDILSIESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLSEQVAQEEPLKDLARLPELFSPGMLVRCVVSSLSVTEKGKKNVKLSLNPKNVNEVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVAGARAFLPLQKAQEYIRQNKGAKLKVGQYLNC
IIEEVKGSGGVVSLSIGHSEVSTAIATEEHNWTLNNLLPGLVVKAQVQKVTPLGLTLNFL
SFFTGLVDFMHLDPKKAGKYFSNQAVRACVLCVHPRTRAVRLSLRPVFLQPGRPLTRLSC
QHLGAVLDNVPVQGFFSKAGATFRLKDGALAYARLSHLSDPKNVFNPETFKPGNTHKCRI
IDYSQMDELALLSLRTSVIEAQYLRYHDIKPGALVKGTVLTIKPYGMLVKVGEQIRGLVP
PMHLADILMKNPEKKYRTGDEVKCRVLLCDPEARKLMMTLKKTLVESKLPAITCYADAKP
GLQTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYAGQVVKVVVLNCEP
SKERMLLSFKLLSDSKKECAGHNQKKRRAVNVGQLVDVKVLEKTKDGLEVAVLPHNIPAF
LPTPHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSERHVLLCRKPALVSTVEGGQDPKSF
SEIHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKV
TNVDEEKQRMLLSLRLSDCTLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAEM
TPGMVLDLEVQEVLEDGSVLFSEGPVPGLVLRANRYHRAGQEVESGQKKKAVILNVDMLK
LEVHVSLCHDLVNRKAKKLKKGSEHQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDTF
RFDSEKLHVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRQTRKDSEAVDEDEEVDATL
VVGTVKKHTLSIGDMVTGTVKSIKPTHVVVTLADGIIGCIHASHILDDVPAGTSPTAKLK
VGKTVTARVIGGRDVKTFKFLPISHPRFIRTIPELSVRPSELEKDGHTALNTHSVSPLEK
IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQA
LKATVVNPDSSKAFLCLSLIGPHNLEKGEVAMGRVVKVTPKKGLTVSFPFGKIGRVSIFH
VSDSYSETPLEDFTPQKVVRCYVLSTAGHVLTLSLRSSRTNPETKSKIADPEINSLKDIR
EGQLLRGYVKSVQPHGVLFGLGPSVVGLAQYPHVSQYSPTEKALYNRHLPEGKLLTAKVL
SLNHQKNLVELSFLPGDTGKPDVFPASLGLLLLKPEERRIEAEVDREGEEERKKNQKRKE
KRSQKGQEEAQLSSKKKEPQKPQAKKQGKRLRLESGSGQERVNKKQKKAAPSEGDDSGVE
VYYREGEEEIEETSVLPKGKPTRPAEVPRLQLSSGFVWDVGLDSLTPALPLRGESSDSEE
DEKPQQSMQKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSPNSSI
LWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKV
FERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRGQ
AGASHRVMQRALECLPVKEHVDVIAKFAQLEFQLGDAERAKAIFENMLSTYPKRTDVWSV
YIDMIIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALE
YVEAKSSVLED
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatggaagaaagcttcccccgagggggtacgagaaagccccacaaatcagac
aaggctttccagcagtcagttgaacaagacaacttatttgatatttctactgaacaagaa
tccaccaaaaggaaaaagaaccagaaaggaccagcaaaaacaaagaagttgaaagttgaa
aagagagaaagcagcaagtctataagagagaaatttgatatccttagtattgagtccctg
tgtgaggggatgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtgatt
agtctccccaatggcctccaggggtttgtgcaagtgactgaaatctgtgatgcttatacc
aaaaagctgagtgagcaagtggcgcaagaagaacctctaaaggacctggcccgcttgcct
gaactcttctcgcctgggatgctggtgagatgtgtggtgagcagtctgagcgtcacagag
aagggcaaaaagaatgtcaagctatctctgaaccccaaaaatgtcaacgaagtattgagt
gctgaggccctgaagccaggcatgctgctcacaggcaccgtgtccagcctagaagaccat
ggctatctagtggacattggtgttgctggggccagagcttttctgccactgcagaaagcg
caggagtatatccggcagaacaaaggtgctaaactgaaggtgggccagtacctgaactgc
atcattgaagaggtaaaaggcagcggaggagttgttagtctgtctattggtcattcagaa
gtttctactgccattgctactgaggagcataactggacccttaataacttgctgccaggg
ctggtagttaaagcccaggtacagaaggtgactccgcttggccttacgctaaacttcctc
tcattcttcactggcctggttgactttatgcacctggatcccaagaaagctggaaaatat
ttctcaaatcaagcagtgcgggcctgtgtcctctgtgtccatcctcggaccagagctgtg
cggctgagcctgcgtcccgtcttcctgcagcctgggcgccccctcacccggctctcttgc
cagcatctgggagctgtgctggataacgttcctgtccagggctttttcagcaaggccggg
gccacctttaggctgaaggatggggctctggcctatgcccggctcagccatctctccgat
cctaagaatgtcttcaatcctgagaccttcaagccagggaacactcacaagtgtagaatc
atcgactacagccaaatggatgaactggctttgctgtctctgcggacgtctgttattgaa
gctcagtatcttagatatcatgacattaaacctggggcattggtaaagggcacggtactg
accataaagccatatgggatgctggtgaaggtgggtgagcaaatcaggggcctggtacct
cccatgcacctggctgacatcctgatgaagaatccagagaagaagtaccgcactggggat
gaggtcaagtgtcgggttctgctttgtgaccctgaagccaggaagctgatgatgaccctg
aagaaaaccctggttgagtccaaactacctgccattacctgctatgctgatgccaagcct
ggtctgcagacacacggctttatcctcagggtcaaggactatggctgcattgtgaagttc
tacaatgatgtgcagggactagtgcccaagcatgagctcagtgccgagtatgtccctgac
ccagagagggtcttttacgctggccaggtggtgaaggtggtggtgctgaactgtgagccg
tccaaggagaggatgctgttgtccttcaagctgttgagtgattcaaagaaagagtgtgct
ggacacaatcagaagaaaagaagagctgttaatgttgggcagttggtggacgtgaaggtg
ttagagaagaccaaagatgggctggaggtggctgtcctgccccacaacattcctgctttt
ctccccacacctcatctgtcagaccatgttgccaacggcccactgttgtatcactggctc
caggctggcgacaccctgcacagagtcctgtgtctgagccagagtgagagacatgttctc
ctttgcaggaaaccagctttggtctccacagtagaaggtggccaggatcccaagagcttc
tcagaaatccatcctggaatgctgctcatcggttttgtgaagagcatcaaggactatggt
gtgttcgtccagttcccctcaggtcttagtggactggcccccaaagctatcatgagtgac
aagtttgtgacctccacaagtgaccactttgtcgaggggcagacagtggttgcgaaggtg
accaacgtggacgaggagaagcagcggatgctcctgtcactgcggctctcggactgcacc
ctgggggacctggctaccaccagcctcctcctcctgagccagtgcctagaggagcggcag
ggtgtgcgcagcctcatgagcaaccgagactctgtgttgatccagacgctggctgagatg
accccgggaatggtccttgacttggaggtacaggaagtgttggaagatggctctgtgctg
ttcagtgagggcccagtgcctggcctggtcctgagagccaacagatatcatcgggcaggg
caggaggtagaatctgggcagaaaaagaaggctgtcatcttaaatgttgatatgttgaag
ttggaagtacacgtttccctttgccacgatttggtgaatagaaaagctaaaaagctgaag
aaaggcagcgaacaccaggcgattgtgcagcacctggaggagtcctttgccgttgcctct
ttagtagaaactggccacctggcagctttctccctgacctctcacctcaatgacaccttc
cgctttgactcagagaagttgcacgtgggacagggtgtctccctaaccctcaagaccaca
gaaccaggagtgactggtcttctcttggctgttgaggggccagctgctaagaggaccatg
agacagacccgaaaggactctgaggcagtcgacgaggatgaggaagtggatgcaactctg
gttgtggggactgtgaagaagcataccctgtccattggggacatggtcacagggactgtc
aagtccattaagcccacccatgtggttgtgaccctggcagatggcatcattggctgtatc
catgcctcccacattctagatgatgttccagcgggcacttctcctactgccaagctgaaa
gttgggaagaccgtcactgcccgagtgattggtgggcgagacgtgaagaccttcaagttt
ctcccaataagtcatcccagatttattcgaaccatcccggagctgagtgttcggccaagc
gagctggagaaggatggccacaccgctctcaacacgcactctgtcagccccttggagaag
attaaacagtaccaggctggtcagaccgtgacttgcttcttgaagaagtacaatgtggtt
aagaaatggcttgaggtggagattgctccggacatccgagggagaattcccttgttgctc
acttctctcagcttcaaggttctgaaacatccagataagaagttccggattggccaggcc
ctgaaggccaccgtggttaacccagattcttccaaggctttcttgtgtctctcgctcata
ggtcctcacaatctcgagaaaggggaagtggccatgggccgagtggtgaaggtgactccc
aagaaggggctgactgtttccttcccctttgggaagatcggaagagtcagcatatttcac
gtgagtgactcctactcggagacgcccctggaagacttcaccccgcagaaggttgtcagg
tgttatgtcctgtccactgcaggccatgtattgactttgtccctgcgatcgtccaggaca
aacccggagacaaaaagcaaaatagcagatcctgagattaactccctgaaggacattcgg
gaagggcagctgctgaggggctatgtgaagtccgtccagccgcacggtgtgctctttggc
cttggcccctcagttgtgggtttggcccagtacccgcatgtctcccagtacagcccgacc
gagaaagccctttataacagacacctccccgaagggaagctgctcacagccaaggtcctg
agcctgaaccaccagaagaacctggtagagctgtcgttcctcccgggtgacactgggaag
ccggacgtgtttcccgcctccctaggactgctgcttctgaagccagaggagaggagaata
gaggcagaggtagaccgcgaaggagaggaggagaggaagaagaatcagaaaaggaaagag
aagaggagccagaaggggcaggaggaggcgcagctatccagcaagaagaaagagccccag
aaaccacaagcgaagaagcagggcaagcggctgcgcctggagtctggaagtggacaggag
agagtgaacaagaagcaaaagaaagccgctccatcagagggagacgacagtggtgtcgag
gtgtattatcgggaaggagaagaggagatagaagagacaagtgtgctgcccaaggggaag
ccgaccaggccagcagaagtgccccggctgcagctgtcttctggctttgtttgggatgtg
gggctagactctctgaccccggccttgccacttcgaggagagagctccgacagcgaggag
gacgagaagccacagcaatccatgcagaagaagaaaagcaagaaggaaagggaattggag
aagcagaaggcagagaaagagctgtcccgcatcgaggaggccctgatggatcccgggcga
cagccagagtcagcagatgattttgaccgactcgtgctgagctcccccaacagctccatc
ctgtggctgcagtacatggccttccacctgcaggccacggagatcgagaaggcccgggct
gtggctgagagggctctcaagactatttccttcagagaggagcaggagaagctgaacgtg
tgggtggcactgctgaacctagaaaacatgtacggctctcaggagtcactgaccaaggtc
ttcgagcgggccgtgcagtacaacgagcctctcaaggtctttctccacctggctgacatc
tacaccaagtcagagaaattccaggaagctggtgaactctacaatcggatgctgaagcgt
ttccggcaggagaaagctgtctggatcaaatatggtgcctttcttctgcggaggggccag
gctggggccagtcaccgtgtgatgcagcgagccctcgagtgcctgcccgttaaagagcac
gtggatgtgattgccaagtttgcccagcttgagttccagctgggggatgcagagcgggcc
aaagccatttttgagaacatgctaagcacctacccaaagcgcacggatgtctggtcggtc
tacatcgacatgatcatcaagcatggcagccagaaggaagtccgggacatcttcgagcgg
gtcattcacctgagcctggcccccaagcgaatgaaattcttcttcaagcgctacctggac
tacgagaagcagcacggcactgagaaggatgtgcaggcagtcaaggcgaaggccctggag
tacgtggaggccaagagctccgtgttggaggactag
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