Equus przewalskii (Przewalski's horse): 103566249
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Entry
103566249 CDS
T04644
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz03082
ATP-dependent chromatin remodeling
epz04714
Thermogenesis
epz05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103566249 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103566249 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103566249 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epz03021
]
103566249 (SMARCC1)
03036 Chromosome and associated proteins [BR:
epz03036
]
103566249 (SMARCC1)
Transcription machinery [BR:
epz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103566249 (SMARCC1)
Chromosome and associated proteins [BR:
epz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103566249 (SMARCC1)
PBAF complex
103566249 (SMARCC1)
GBAF(ncBAF) complex
103566249 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
Motif
Other DBs
NCBI-GeneID:
103566249
NCBI-ProteinID:
XP_070431647
LinkDB
All DBs
Position
15:40660079..40825664
Genome browser
AA seq
1256 aa
AA seq
DB search
MWVPRPAIDTLNGLSLWIFSHQPCSLWQWQEMQLLTANDRTQEPPERVRRAEAKAGRQRR
QAHTTPQLAEEAGGGAPPRPAWREYRACGRACPRRLGRRSREGAGPGIRAGKGLAGRGRE
AAVAAARARGCERGAPRGPGRAGRWGRRTATMAAAAGSGGLGAAAGATSAGGAAAAAGLA
VYRRKDGGPASKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQE
DAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNV
EMFMNIEKTLVQSNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPY
PSSQEDEEWLRPVMRKDKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHAKW
ILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSP
SPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNV
NPKKDSENTPVKGGTVADLDEQDEEAITTGGKEDEDPSKGDQSRSVDPGEDNVTEQTNHI
IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST
ACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPL
HLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETL
LLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFS
QSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASG
KVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDTDGQQPEKAENKGENETDEGDKAQD
GENEKNGEKEQDSEVSEDAKSEEKETDENKELTDTCKERESDIGKKKVEHEISEGNVATA
AAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALE
QQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQAHQHSGGPGLATLGTAGHPG
MMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQPMPGRMIPTVAANIHPPGSGPT
PPGMPPMPGNILGPRVPLTAPNGMYPPPPQQQQPPPPPADGVPPPPAPGPPASAAP
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgtgggttcctcgaccagcgatcgacaccctaaacgggctttccctttggatcttctca
caccagccctgttctctctggcagtggcaagagatgcagctgttgaccgccaacgatagg
acacaggaacccccggaaagagtcagacgggcagaggcgaaggccgggcggcagagaagg
caggcgcacacgacgccgcagctggcggaagaggcgggcggaggcgctcctccgaggccc
gcctggcgcgagtaccgcgcatgcgggcgcgcgtgccctcgtcggttagggcgccggtcc
cgagaaggggcggggccgggcatccgcgccggaaaggggctggctgggcggggccgggaa
gcggcggtggcggctgcgcgcgcgcgcgggtgcgaacggggggcgccgcgagggccgggg
cgggccgggcggtggggacgacggacggcgacgatggccgcggcggcgggcagcggcggg
ttgggggcggcggcgggcgccacgagtgcaggaggtgcggcggcggccgcaggcctggcc
gtttatcggcggaaggacgggggcccggccagcaagttttgggagagcccggagacggtg
tcccagctggattcggtgcgggtctggctgggcaagcactacaagaagtatgttcatgca
gatgctcctaccaataaaacgctggctgggctggtggtacagcttcttcagttccaggaa
gatgcctttgggaagcatgtcaccaacccggccttcaccaaactccctgcaaaatgtttc
atggatttcaaagctggaggcaccttgtgtcacattcttggggctgcttacaagtataaa
aatgaacagggatggcggaggtttgatcttcagaatccatcccgaatggatcgtaatgtt
gaaatgtttatgaacattgaaaaaacattggtgcagagcaattgtctgaccagacccaac
atctacctcattccagacattgatctgaagttggctaacaaattgaaagatatcatcaaa
cgacatcaggggacatttactgatgagaagtcaaaagcttcccaccacatttatccatat
ccttcctcacaagaggatgaagaatggttgagaccagtgatgagaaaagacaagcaggtg
ttagtgcattgggggttttacccagacagctatgatacttgggtccatagtaatgatgtt
gatgcagaaattgaagatccaccaattccagaaaagccatggaaggttcatgcgaaatgg
attttggacactgatgttttcaatgaatggatgaatgaggaggattatgaggtggatgag
aacaggaagcctgtgagttttcgtcagcgaatttcaacaaagaacgaagagccagtcaga
agtccagagagaagagatagaaaagcatcagctaatgctcgaaagaggaaacattcgcct
tcccctccgcctcccacacccacagaatcccggaagaagagtgggaagaaaggccaagct
agtctttatgggaagcgcagaagtcagaaagaagaggatgagcaggaagatcttaccaag
gacatggaagacccaacccctgtacccaacatagaggaagtcgtgcttccgaaaaatgta
aacccaaagaaagatagtgaaaatacacctgttaaaggaggaactgtagcagatctagat
gaacaagatgaagaagcaatcacgacaggaggaaaggaagatgaagatcctagcaaaggt
gatcagagtcggtcagttgaccctggtgaagataatgtgacagagcagaccaatcacatt
atcattcctagctatgcatcatggtttgattataactgtattcatgtgattgaacggcgt
gctcttcctgagtttttcaatgggaaaaacaagtcgaagactccagagatatacttggca
tatcgaaattttatgatcgacacatatcgcctaaaccctcaagaatatttaactagcact
gcttgtcggaggaacttgactggagatgtgtgtgctgtgatgagggttcatgccttttta
gagcaatgggggctcgttaattaccaagtggatccagaaagtcgacccatggcaatggga
ccgcctccgactcctcatttcaatgtattagctgatactccatctgggcttgtgcctcta
catcttcgatcaccacaggtccctgctgctcagcagatgttaaattttcctgagaaaaac
aaggaaaaaccaattgatttgcagaactttggtcttcgtactgatatctactccaagaaa
accttagcaaagagtaaaggtgctagtgcgggaagagaatggactgaacaggaaaccctt
ctactcctggaggccctggagatgtacaaggatgattggaacaaagtatcagaacatgtt
ggaagtcgtactcaggatgaatgcatcctccactttttgaggcttcccattgaggaccca
taccttgagaattcagatgcttctcttgggcccttggcctaccagcctgtccccttcagt
caatcaggaaacccagtcatgagcactgttgcttttttggcatctgtggtggaccctcgt
gtggcatctgctgcagcaaaagcagctttggaggaattttctcgggttcgggaagaggta
ccactggaattggttgaagctcatgtgaagaaagtacaggaagcagcacgagcctctggg
aaagtggatcccacctatggcctggagagcagctgcattgcaggcacagggccggatgaa
ccagagaaacttgaaggagctgaagaggaaaaaatggaaacagatactgatggtcagcag
cctgaaaaggcagaaaataaaggggaaaatgaaacagatgaaggtgataaagcacaagat
ggagaaaatgaaaaaaatggtgagaaggaacaggatagtgaagttagtgaggatgccaaa
tcagaagaaaaggagactgatgagaacaaggaactcactgatacttgtaaagaaagagaa
agtgatattggaaagaaaaaagtagaacatgaaatctctgaaggaaatgtagccacagcc
gcagcagctgctcttgcctcagctgcaaccaaagccaagcacctggctgctgtggaggaa
aggaagatcaagtctctggtagctctcctggttgagacgcagatgaagaagctagagatc
aaactgcgacattttgaggagctggagactatcatggacagagagaaagaggctttagaa
caacagaggcagcagttgcttactgaacgccaaaacttccacatggaacaactgaaatat
gctgaattgcgagcccgacagcaaatggaacagcagcagcatgggcagaaccctcaacag
gcacaccagcattcaggaggacctggcctggcaacacttggaacagcagggcaccctggc
atgatgcctcatcagcagccccctccctaccctctgatgcaccaccagatgccgccacct
catccaccccagccaggtcagataccaggcccaggttccatgatgcctgggcagcccatg
ccaggccgaatgattcccactgttgcggccaacatccacccccctgggagtggccctacc
cctcctggtatgcctccaatgccaggaaacatcttaggaccccgggtacccctcacggca
cctaatggcatgtatccccctccgccgcagcagcagcagccaccaccaccacctgcagat
ggagtccctccacctcctgctccaggcccaccagcctcagctgctccctag
DBGET
integrated database retrieval system
