Equus przewalskii (Przewalski's horse): 103566398
Help
Entry
103566398 CDS
T04644
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103566398 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
epz04147
]
103566398 (COL18A1)
00535 Proteoglycans [BR:
epz00535
]
103566398 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
epz00536
]
103566398 (COL18A1)
Exosome [BR:
epz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103566398 (COL18A1)
Proteoglycans [BR:
epz00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103566398 (COL18A1)
Glycosaminoglycan binding proteins [BR:
epz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103566398 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
LDL
Motif
Other DBs
NCBI-GeneID:
103566398
NCBI-ProteinID:
XP_070454043
UniProt:
A0ABM4MMW8
LinkDB
All DBs
Position
27:40509300..40620006
Genome browser
AA seq
1752 aa
AA seq
DB search
MAPHPSSRLRLLLLLCCLGAARAQLLSLLWPWSTGTKGPSAPPVSVPRGSPSVQSTEDTT
THVAHQDGPTEQGTAPTSRELPPERLEAGLGRASAAPTASTESPENIAGVGAEILNVAMG
IRNFVRLWDNTTPAESSTRAGTATPATPTDLLTLPGPSSASQENGTVLWPSSGAPSSPVT
QRTEAGTSPVPTQPPPSPGTPQALLREPSLPPPSPGRALSSTLGGAPLWGSRPSPGQLQD
LDGEELLPVAARPGQQHRHADVGRHSLHLLPLVTGSLGTALSALSSDSPTELSQIALSAL
IGDSGAWIPHVANSVGPGLANNSSLLGADPLTPAGQPVHNAAGRCLPLPPSLPVCGRLGI
GRSWLPNHLHHVRSEEVQAAARAWGGLLRTHCHRFLAWFFCLLLAPPCGPPPAPPPCRQF
CEVLEDACWSHLDGGGLPVSCASLPAQEDGYCVFIGPAADSARTEVGLLQLLGDPPPPQV
SRVDDPDVGPAYVFGPDASGGQAARDLFPSRFFRDFSLLLHVRPDTAGAGVLFAVTDAAQ
AVVSLGVKLAAVRDGHQDVQLLHAEPGAARTRVAAAFRLPAFAGQWARLALSVDGAAAAL
FVDCEEVQRVPLARAARGVELEPGARVFVAQAGRADPDTFQGMIAELRVRADPHVSPVHC
LEDDDDDDDGASGDFGSGLEEPRERLGEEPGTSLTLGLPDAPPVTSPPLAGSSDVEDSRT
EEIEEETTVSSLGAHTLPGSDPAATWDGSAWSPGGSLREGGLKGQKGEPGLPGPVGPQGP
AGPAMHSPDAQPIPGPQGPPGPPGPPGKDGAPGRDGEPGDPGEDGRPGDTGPQGFPGTPG
DVGPKGEKGDPGVGPRGPPGPQGPPGPPGPSFRPDKLTFIDMEGSGFGGDLETLRGPRGF
PGPPGPPGVPGLPGEPGRFGMNSSDVPGPAGLPGVPGREGPPGLPGPPGPPGPPGRDGRP
GGTGQKGSLGEAGPPGPKGNKGDPGPIGAPGENGLAGPPGPAGPPGPPGPPGLPGPPGPG
LAAGFDDMEGSGGPFWSTARGADGPQGPPGLPGVKGDPGPAGPPGTKGEVGADGGPGFPG
LPGREGAAGAQGPKGEKGTQGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDRAVASVP
GPEGRPGLAGFPGPAGPKGDLGSKGQQGLPGPKGEKGEPGAVFGPDGGVLTASQKGAKGE
PGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDASVRFGMKGLPGPPGPPG
PPGLPGTPVYDTNAFLESGRPGPPGLPGHQGPSGPKGDKGEVGPPGPPGQFPLDLLQLEA
EMKGEKGDRGPAGQKGERGEPGAGGFFGSSVPGPPGPPGYPGIPGPKGESIRGQPGPPGP
QGPPGIGYEGRQGPPGPPGPPGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGTMGTSSG
QVRIWATYQTMLDKVPEVPEGWLIFVAEREELYVRVRNGFRRVLLDARMPLPRGTDNEVA
ALQPPVVQLHEGNPYPRREVPHSTARPWRADDILASPPRLPDPQPYPGAPHHGSYVHLRP
ARPTSSLTHTHQDFQPVLHLIALNSPQSGGLRGIRGADFQCFQQARAVGLAGTFRAFLSS
RLQDLYSIVRRADRASVPIVNLRDEVLFPSWEALFTGSEGRLKPGARIFSFDGRDVLQHP
AWPQKSVWHGSDPSGRRLTESYCETWRTEATAATGQASSLLAGRLLEQKSASCHNAFIVL
CIENSFMTSSSK
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggctccccaccccagcagccgcctccgcctgctgctgctgctttgctgtctcggggcc
gcccgggctcaactgctgagcctcctctggccgtggtccactgggaccaaagggccctca
gccccgccggtctccgtgccccggggcagcccatctgtgcaatccacagaggacaccacc
acgcacgtggcccaccaggatggccccaccgagcaggggacagctcccaccagccgtgag
ctgcccccggagaggctggaggctggcctgggccgggcctccgctgcccccacggcctcc
accgagagcccagagaacatcgccggcgtcggggccgagatcctgaacgtggccatgggc
atccggaactttgtccggctgtgggacaacaccacccccgccgagagctccaccagggcg
gggacggcaacccctgcgacccccacggacctcctcaccctccctgggccttccagcgcc
tctcaggagaacgggaccgtgctctggccaagtagcggggccccaagctctcctgtcacc
cagaggaccgaggccggcacctcgccagtgcccacccagccgcctccctcccctggcacg
ccccaggcactgctcagggagccctcgctgccgccaccgtccccaggtagagctctctcc
tccacgctgggcggggcccctctctggggaagccggccgtccccagggcagctgcaggat
ctggatggtgaagaactcttgcccgtggcagcccgtcccggccagcagcaccgacacgct
gacgtcggcaggcactcgctccatctgctccccctggtgacgggttcgctgggcactgcc
ctctcggctctctcctctgactcccccactgagctgtctcaaatcgcactctcagcttta
attggggacagtggtgcttggattccccacgtggctaattctgtgggacctggtcttgct
aataactcctcgctgctcggggctgacccactgacccctgccgggcagcctgtccacaat
gccgctggccgctgcctgcccctgccgccctccctgcccgtctgcggccgcctgggcatc
gggcgctcctggctgcccaaccacctccaccatgtgcgcagcgaggaggtgcaggccgcc
gcgcgtgcctgggggggcctcctgcggacccactgccaccgcttcctcgcctggttcttc
tgcctgctgctggcccccccctgcggcccgccccccgccccaccgccatgccgccagttc
tgtgaggtcctggaggacgcgtgctggagccacctggacgggggcgggctgccggtcagc
tgtgcctcgctccctgcccaggaggatgggtactgtgtgttcattgggccggctgcagac
agcgcacgcacggaggtggggctcctgcagctgctcggcgaccccccgcccccgcaggtc
tcccgggtggacgaccccgacgtcgggccggcctacgtcttcggcccggatgccagcggc
ggccaggcagcgcgggacctcttcccgagccggttcttccgtgacttctcgctgctgctc
cacgtgcgcccggacacggcgggcgcgggcgtgctcttcgccgtcacggacgcggcgcag
gccgtggtctcgctgggcgtgaagctggcggccgtgcgtgacggccaccaggacgtgcag
ctgctccacgcggagccgggcgcggcccgcacacgcgtggccgccgccttccgcctgccc
gccttcgccggccagtgggcgcgcctggcgctcagcgtggacggtgcggccgccgcgctc
ttcgtggactgcgaggaggtgcagcgcgtgcccctggcgcgggccgcgcgcggcgtggag
ctggagcccggcgcccgcgtcttcgtggctcaggccggacgagcggaccccgacacgttc
caggggatgatcgcggagctgagagtgcgcgcggacccccatgtgagccccgtgcactgt
ctggaggacgacgatgacgatgacgatggggcatccggagacttcggcagcgggctcgag
gagccccgggagcgtctcggggaggaaccgggcacgtccctgacacttggcctccccgac
gctcccccagtcacctcaccacccttggctggaagcagcgacgtggaagattccagaact
gaagaaattgaggaagaaactactgtgtcttcattaggagctcacaccctccccggctca
gatccagccgccacgtgggacggcagtgcctggagccctgggggcagcctgcgagaggga
ggcctcaaggggcagaagggggagcctggcctacctggtccagttggtccccagggtcct
gcaggcccggccatgcacagccccgatgcacagcctatccctgggccacagggacccccg
gggcccccagggcccccagggaaggatggtgcccccggaagggacggtgaaccgggggat
cccggtgaagatggcagacctggtgacactgggccgcagggcttcccggggaccccagga
gacgtgggccccaagggtgagaagggggatcctggtgttgggccaagaggacccccagga
ccccaagggcctccaggaccaccaggaccctcattcagacctgacaagctgaccttcatt
gacatggaggggtctggcttcggcggcgacctggagaccctccggggcccacgaggcttc
cccggcccccccgggcctcctggcgtcccaggcctgcctggagagccaggccgcttcggt
atgaacagctcagacgtcccaggacctgcaggcctccccggcgtgcctgggcgcgagggg
ccccccgggctccccggacccccgggacccccagggcctccaggaagagacgggcggcca
ggagggaccggccagaaaggcagcctcggtgaagccggccccccaggacctaagggaaac
aagggagaccccggccccattggcgctcctggcgagaacggcttggcaggaccccccgga
ccagctgggccgccggggcctccagggccccccgggctcccggggcccccgggaccagga
ctcgccgcagggtttgatgacatggaaggctccgggggacccttctggtcgacagcgcga
ggtgctgacgggccacagggaccgcccggcctgcctggagtcaagggggatcctggacca
gctgggccaccgggcactaagggagaagtcggagcagatggaggtcccgggttccccggc
ctccccggcagagagggcgcggctggagcccaggggccaaaaggagaaaaagggacccag
ggagagaaaggcgacccagggaaggacggagtggggcagccaggcctccctggaccccct
ggacccccagggcctgtcgtctacgtgtcggagcaggacagagcagtggccagcgtgcca
ggacccgagggccgccccgggctcgctggctttcccggaccagccgggccgaagggagac
ctgggctccaaaggccagcagggcctcccaggacccaagggcgagaagggtgagccgggt
gcagtctttggccccgatggcggagtgctgaccgcctcccagaaaggagccaagggtgag
cccggcttccgaggacccccggggccatacggacggcctgggcacaagggagagattggc
ttccccggacggccgggtcgccccgggatgaacggcttgaaaggggagaaaggggagcca
ggagacgccagcgtcaggtttggtatgaagggtctgcctggccccccggggcccccaggg
cccccaggccttcctgggactcctgtctacgacacgaacgcgtttttggagtctggccgc
cctggacctccaggattgccagggcaccagggaccttctggaccgaagggtgacaaagga
gaagtgggtccccctggaccacccgggcagttcccgttggacctcctccagctggaggct
gaaatgaagggggagaagggtgaccgagggcctgccggacagaaaggtgaaaggggcgag
cccggagctggcggattcttcggctccagtgtgcccggcccccccggcccaccgggctac
cctgggattccgggtcctaagggagagagcatccgaggacagcctggcccacctggacct
cagggaccccctggcatcggctatgaaggacgccaggggcctcccggaccccctggtccc
ccaggccccccagggcccccttcctttcctggcccttacaggcagaccatcagcgttcca
ggccctccaggcccgcctgggcccccaggaccccccggcaccatgggcacctcctcaggg
caggtgaggatctgggccacgtaccagaccatgctggacaaggtgcccgaggtgccggag
ggctggctcatcttcgtagccgagagggaggagctgtacgtccgcgtccggaacgggttc
cggagggtgctgctggacgcccggatgcccctcccccgcgggacggacaacgaagtggcc
gccttacagccccccgtggtgcagctccacgagggcaacccgtacccccggcgggaggtt
ccccactccacggcacgaccctggcgggcggacgacatcctggccagccccccacgtctg
ccggacccccagccctaccctggagccccgcaccatggctcctatgtgcacctccggccg
gcgcgccccaccagctcactcacccacacccaccaggactttcagccggtgctccacctg
atcgcactcaacagcccgcagtcgggcggcctgcgcggcatccgcggcgcggacttccag
tgcttccagcaggcgcgcgccgtggggctggccggcaccttccgcgccttcctgtcctcg
cggctgcaggacctctacagcatcgtgcgccgtgctgaccgtgccagtgtgcccatcgtc
aacctcagggacgaggtgctgttccccagctgggaggccttgttcacgggctccgagggc
cggctgaagcccggggcccgcatcttctctttcgatggcagagacgtcctgcagcacccc
gcctggccccagaagagcgtgtggcacggctcggaccccagtgggcgccggctgaccgag
agctactgcgagacgtggcggaccgaggccacggcggccacaggccaggcatcctcgctg
ctggcgggccggctgctggagcagaaatccgccagctgccacaacgccttcatcgtcctc
tgcatcgagaacagcttcatgacctcctcctccaagtag
DBGET
integrated database retrieval system
