Equus przewalskii (Przewalski's horse): 103566517
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Entry
103566517 CDS
T04644
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
epz
Equus przewalskii (Przewalski's horse)
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epz03041
]
103566517 (YTHDC2)
Enzymes [BR:
epz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103566517 (YTHDC2)
Spliceosome [BR:
epz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103566517 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_16
AAA_7
AAA_29
UvrD-helicase
ABC_tran
T2SSE
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
103566517
NCBI-ProteinID:
XP_070425642
LinkDB
All DBs
Position
13:complement(57656334..57732297)
Genome browser
AA seq
1445 aa
AA seq
DB search
MSRPSSVSPRPPAPGAGGGGGGGGGGPSQCGPGGGGRAKGLKDIRIDEEVKIAVNIALER
FRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMM
TCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIP
QIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF
KNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGV
LLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNL
FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWY
SAQENTFKPESQRQRTVPNVTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSD
IWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHS
KASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAY
HHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADSTHR
YQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFD
ALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQE
LCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAIQMLKTIDAMDAWEDLTELGYHLADL
PVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFS
DHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGG
GDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVLLTGPKEKKVRFHPTSVLSQPQYK
KIPPTNGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQ
EPSSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASLLLQLRQKWHSLFL
RRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRS
NNSRKSSADTEFSDESTTAERVLMKSPSPALHPPQKYKDRGISHPKRSADDRSDQSSVKS
ADSSYPSPCASPSPPPSGKVEYLKGDTEGQGSKSPSPRPNMPIRYFIMKSSNLRNLEISQ
QKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGL
GGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGE
KSTTD
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcccagcagcgtctccccgcggccgccggctcctggcgcgggcgggggtggc
gggggtggcgggggcggcccctctcagtgtggccctgggggcggtggccgggccaagggg
ctgaaggacatccgtatagacgaggaggtgaagatcgcagtcaatatcgctctggagcgc
ttccgatatggggaccagagagaaatggagtttccttcttctttgaccagtactgaaagg
gcctttattcatcgattgagtcagtctcttggtttggtctctaaaagtaaaggaaaggga
gcaaatagatacctaactgtgaagaagaaagatggatcagaaacagctcatgcaatgatg
acctgtaatttgactcataatacaaaacatgctgttaggagcctaattcagagatttcct
gtcaccaataaagagcgtactgaacttctgcctaaaacagaaagaggaaatgtgtttgca
gttgaagctgaaaaccgggagatgagcaagacaagtgggcgactcaataatggcatacct
cagattccagtgaaaagaggagaatccgaatttgattctttcaggcagtctctgccagtg
tttgagaaacaagaagagattgttaaaataattaaggaaaataaagtagtgttgattgta
ggagaaactgggtctggaaagactacacagattcctcagttccttttagatgattgcttt
aaaaatggtatcccctgtcgtatattttgtactcaaccaagacgattagcagctattgct
gtggctgaaagagttgctgcagagagaagagaaagaattggtcaaacaattggatatcaa
atccgattagaaagcagggtttctccaaagacacttctgacattttgcactaatggggta
ttgcttcgtacattgatggcaggagatagtacattgtcaactgtgacacatgttattgtg
gatgaagtacatgaaagggatcgatttagtgattttttacttacaaagttaagagatttg
ttgcaaaagcacccaactttgaaactaattctttctagtgctgccttggatgtaaatctt
tttataagatattttggaagttgtccagtcatatatatacagggaagaccatttgaagta
aaagaaatgtttctggaagacattttaagaaccactggatacacaaacaaagaaatgttg
aaatacaaaaaggaaaaacagcgagaagagaaacaacaaaccacgcttacagaatggtat
tcagctcaagagaatacttttaaacctgaatctcagaggcagagaactgttccaaatgtg
actgatgagtatgatttattagatgatggtggtgatgctgtcttcagtcagttgacagaa
aaagacgttaattgccttgaaccatggttaataaaggagatggatgcttgtctttctgat
atatggctacataaagatgttgatgcctttgctcaggtctttcaccttattttaactgaa
aatgttagtgttgattacagacatagtgaaaccagtgcaacagctctgatggttgctgca
ggacgaggtttttcaagtcaagtagagcagttaattagtatgggagccaatgtccatagt
aaagcatcaaatggctggatggctttagattgggctaaacactttggacagaccgaaatt
gtggatcttctagaatcttacagtgcttcattggaatttggaaatctagatgaaagttct
ctggttcaaacaaatggaagtgacctcagtgcagaagacagagagctcctaaaagcttat
catcatagttttgatgatgaaaaagtagacttggatttgatcatgcatcttctgtacaat
atctgccatagttgtgatgctggtgcaattttaattttcctacctggatatgatgaaatt
gttggactgagggatcgcatcctgtttgatgacaagcggtttgctgacagtacacataga
tatcaagtctttatgcttcattcaaatatgcaaacatccgatcaaaagaaggtattaaaa
aacccacctgcaggtgttcgaaaaataatcctttccaccaatattgctgaaaccagtatc
acagtcaatgatgttgtctttgttattgattctggtaaggtgaaagagaaatcctttgat
gccctgaattttgttacaatgttaaaaatggtgtggatttccaaagctagtgccatacaa
cgaaaaggcagggcagggagatgtagacctggaatttgtttccggctcttcagtagactc
cgattccagaatatgttggaatttcagactccagaacttttgagaatgccattacaggaa
ctttgtttacataccaagctgttagccccagttaattgtcctattgctgatttccttatg
aaagctcctgaacctccaccagctttaattgtaagaaatgctatacaaatgcttaagaca
atagatgcaatggatgcatgggaagatctcactgaacttggatatcatttggctgacttg
ccagtagaaccacatcttggtaaaatggttctgtgtgctgttgttttaaagtgtctggac
cctatccttacaattgcctgcacgctagcctatcgagacccttttgtcctaccaacccag
gcctctcagaaacgtgcagctatgctttgtaggaaacgttttactgcaggaactttcagt
gaccatatggcacttcttagagcattccaggcatggcagaaagcacgaagtgatgggtgg
gagcgagccttttgtgagaagaattttctttcgcaagctaccatggaaataatcataggc
atgagaactcagttacttggtcaacttagagcatcaggttttgttagagcgagaggtggt
ggtgacattcgagatgttaacacaaattccgagaattgggctgtcgttaaagctgcattg
gtggcaggcatgtatcctaatttagtccatgtggacagagagaatgtattattgacaggg
ccaaaggagaaaaaagtacggttccatcccacttcagtgctcagtcagcctcaatataaa
aagattcctccaactaatggtcaagctgcagcaattcaggcattgcccacagattggctt
atttatgatgaaatgaccagagcccatagaatagctaatattagatgttgttcagcagtg
acacccgtcactgtattggtattctgtggaccagctaggttggcaagtaatgctcttcag
gaaccgtcatcctttcgagcggatggtattcctaatgacagtagtgatagtgaaatggaa
gacagaactactgctaatttggcagctttgaaacttgatgagtggctcaatttcaaacta
gagcctgaggcagccagtttattgttgcagctcagacagaagtggcacagcttattttta
cgccgaatgagagctccatctaaaccttggtctcaagttgatgaagctaccataagagcc
atcatagctgttttaagcactgaagaacagtctgcaggtttacaacaaccatctggaatt
ggccaaaggccaaggcctatgtcttcagaagagcttcctttggcatcatcttggaggtca
aataatagtaggaaaagttcagcagatactgaattttctgatgagtctactactgcagaa
agagtcttgatgaaatctccatctccagcactacacccacctcagaagtacaaagataga
ggaatttcacatcctaaacgaagcgccgatgaccgatcggatcagtcttctgtgaagtct
gcggacagcagttacccaagtccttgtgccagtccttcccctccgccctcaggaaaggta
gagtatctgaagggcgatacagagggacagggctcaaaatctccttcaccaagaccaaac
atgcctattcgatacttcataatgaagagtagcaatttgagaaaccttgaaatttctcaa
cagaagggtatctggtctacaacccctagtaatgagcggaagctaaatcgagccttttgg
gaaagcagcatggtttacttggtattttctgttcaaggatctggacatttccagggattt
tctaggatgtcttctgagataggaagggagaaaagccaggactggggctccgctggcctg
ggaggagtgtttaaggtggagtggatacgaaaagaaagtcttccctttcagtttgcacac
catttactcaatccttggaatgacaacaagaaagtccagataagcagagatgggcaggaa
ctagaacctcaggttggtgaacagttgctgcagttatgggagcgccttccattgggagaa
aaaagcacaactgattga
DBGET
integrated database retrieval system
