Enterobacter quasiroggenkampii: OM418_12205
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Entry
OM418_12205 CDS
T09002
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
equ
Enterobacter quasiroggenkampii
Brite
KEGG Orthology (KO) [BR:
equ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
equ03016
]
OM418_12205
Enzymes [BR:
equ01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
OM418_12205
Transfer RNA biogenesis [BR:
equ03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OM418_12205
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
WFC80833
UniProt:
A0ABY8DZ02
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All DBs
Position
2584292..2586226
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
MAVIHTEKDRESAEPEELIEPFLTRFVGKVQRKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGADHFVPWWVTLARHNLEKEAPNGVAT
EMQDEGLTRRDLTALEFVTIDSASTEDMDDALYAEESADGKLHLTVAIADPTAWIVEGSK
LDETAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMTIAADGAIEDDIEF
FAATIESKAKLAYDNVSDWLENTGSWKPESDAIAAQIRLLHRICLNRGEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKNHDVHVDPEEVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGETVARPQEDTTLQMADRRRLNRM
AERDVGDWLYARFLQDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
MVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggcttccttgaagttgacgcg
cagaaaagctacttcattccgccaccgcagatgaagaaagtgatgcatggcgatcgcgtc
atggccgtcattcataccgagaaggatcgcgagtccgccgaaccggaagaactgatcgaa
ccgttcctgacccgttttgtgggtaaggtgcagcgaaaagacgatcgtctttctatcgtg
ccggatcatcctctgctgaaagatgccattccctgccgcgccgcccgtggtgttgagcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcatcctctgaaaggcgat
cgcggtttctatgcggaactgacccagttcattacctttggcgccgatcatttcgtgcca
tggtgggtcacgctggcacgccacaatcttgaaaaagaagcgccgaacggcgtggcaacc
gagatgcaggacgaaggtctgacgcgtcgcgatcttaccgcgctggagtttgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctctacgctgaagagagtgccgacggc
aaactgcacctgaccgttgccattgccgatcccaccgcctggattgttgaaggcagtaag
cttgacgaaacggcgaaaatccgtgcgttcacgaactacctgccgggcttcaacatccca
atgctgccgcgcgaattgtcagacgatctctgctcgctgcgtccgaatgaagtgcgtccg
gtccttgcctgccgcatgaccattgctgcggatggcgcgattgaagacgatatcgagttc
tttgccgccaccatcgagtcgaaagccaagctggcctacgataacgtctccgactggctg
gaaaataccggtagctggaaacctgaatcagacgccattgccgcgcagatccgtctgctg
catcgcatctgtctgaaccgcggcgagtggcgtcaaacccatgcgctggtgttcaaagat
cgcccggattatcgctttgttctgggtgagaaaggcgaagtgctggatatcgtggccgaa
ccgcgacgcattgcgaaccgcatcgttgaagaggcgatgatctccgccaacatctgtgcc
gcacgcgtgctgcgcgacaagctgggctttggcatttacaacgttcataccggctttgat
ccggcgaataccgaagcgctggcagccctgctgaagaatcacgacgtgcacgtcgatccg
gaagaagtgctcacgctgccgggcttctgcaagcttcgccgcgaactggacgcgcagcca
tcgggcttcctggacagccgcattcgtcgcttccagtccttcgcagaaatcagcactgag
cctggcccgcactttggtctcggcctcgaagcctacgcgacctggacgtcaccgatccgt
aagtatggcgatatggttaaccaccgtttgctgaaagcgattatcaaaggcgaaaccgtt
gcccgtcctcaggaggacaccacgctgcagatggccgatcgccgtcgtctgaaccgcatg
gcggaacgtgacgttggcgactggctgtacgcacgcttcctgcaggataaagccggtacg
gatacccgtttcgccgcagaaatcatcgatatcagccgcggagggatgcgcgtccgtctg
gtcgataacggtgctgtcgcgtttattcctgcgccattcctgcatgctgtgcgcgatgaa
atggtctgtagtcaggaaaacggtacggtgcaaattaaaggtgaaacagtttacaaagtc
accgacgtgattgacgtcaccattgctgaagtccgtatggaaacccgcagtattatcgcg
cgtcctgtcgcctga
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