Enterobacter quasiroggenkampii: OM418_12210
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Entry
OM418_12210 CDS
T09002
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
equ
Enterobacter quasiroggenkampii
Pathway
equ02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
equ00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OM418_12210 (pdeR)
Enzymes [BR:
equ01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
OM418_12210 (pdeR)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
WFC80834
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All DBs
Position
2586550..2588541
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AA seq
663 aa
AA seq
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MMDDLEQNLLFRYMGTHSPWWRLSADSNALHLAASENADVTQVIALDDDQADLIRHLTVI
TSSISMTLSLFGEDLPVHLVGRKITRNEWAGTASAWHDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDQNGNIQRFNRLSEEYTGLKEQEVIGQNVFKLFMSRSEAAASKRNISGFFRNG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHDLISDAISHRGDTQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLDEEQVLARLGGDEFIVMATNTSQGSLEAMASRILTRLRQPFRIGLIEIYTGCSLGI
ALAPQHGNDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLLIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPVDVELTESCLIENE
ELALSVIQQFSRLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQSISQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWLKRYQVR
KQH
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgatctggagcagaatttgctgtttcgctacatggggactcacagcccatgg
tggcgtttgtcagctgacagcaatgctctgcaccttgccgccagtgaaaatgccgatgtc
actcaggtgattgcgctggacgacgatcaggccgatcttatccgtcacttaaccgtgatt
acctccagcatttccatgacgctctcgttattcggggaagacctcccggttcaccttgtt
gggcggaaaattacccgtaacgagtgggccggtaccgcttccgcctggcatgataccccc
tccgtggcgcgcgacctggctcagggactctctttcgcggaacaggtcgtttcagaggct
aactccgtcattgttattctcgatcagaacggcaatattcagcgctttaaccgactaagc
gaagagtataccggcctgaaagagcaggaagtgattggtcagaacgtgtttaagctgttt
atgagccgcagcgaagcggcagcctcaaagcgcaatatttccggtttcttccgcaacggc
agttcctatgaagtcgagcgctggatcaaaacgcgtaaagggcaacgactgtttctgttc
agaaacaaattcgttcacagcggcagcggtaaaaatgaaattttccttatctgttccggt
accgatattaccgaggaacgccgcgctcaggagcgactgcgcgtgctggccaataccgat
accatcaccggcttgccaaaccgcaatgcgatccacgacctgatttctgacgccatcagt
caccgcggtgacacgcaggttggtgtggtgtatctcgatctggacaactttaaaaaggtc
aacgacgcttacgggcatatgtttggcgatcagctgttacaggctgtcgcgctcgccatt
ttgagctgtctggatgaggaacaggtgctggcacgacttggcggtgatgagtttatcgtc
atggccaccaatacctctcagggctctctggaagcgatggcgtcgcgcattttaacccgc
ctgcgccagccgttccgaatcggtctgattgaaatttacaccggctgttccctgggcatc
gccctcgccccgcagcatggcaacgaccgagaaagcgtcattcgtaacgccgataccgcc
atgtacaccgccaaagagaacggccggggcaagttctgcgtcttctcgcccgagatgaac
caacgcgtgtttgagtatctctggctggataccaacctgcgtaaagcgctggataacgat
cagctcttgatccactaccagccaaaaatcacctggcgcggcgaggtcagaagcctggaa
gcgctggtacgctggcaatcacccgaacgcggtttgatcccaccgctggagtttatctct
tatgccgaggagtcggggttgatcgtgccgctgggccgctgggtgatgctcgatgtggtt
cgccaggtggcaaaatggcgcgataagggaataaacctgcgcgtggccgtgaacgtctct
gcgcgtcagctggccgaccagactatctttagtgacttaaagcaagcgctgaaggatctt
aactttgaatactgcccggtggacgtcgaattaaccgaaagctgtcttatcgagaacgaa
gagctggcgctctccgtgatccagcagttcagcaggctgggggcgcaaattcatctcgac
gattttggtaccggctactcttccctttcgcagctggcccgcttccctattgacgccata
aaactcgatcaatcgtttgtcagggatattcataagcagtccatctcccagtcactggtg
cgcgccatcgtcgcggtggcgcaggcgttaaacctgcaggtgattgccgaaggggtcgaa
aatgcaaaagaagacgcctttctgaccaagaacggcgtcaacgaacggcagggttttctg
tttgctaagccgatgcccgctgccgcattcgagcgatggctaaaacgctatcaggtgcga
aaacagcattaa
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