Enterobacter quasiroggenkampii: OM418_12285
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Entry
OM418_12285 CDS
T09002
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
equ
Enterobacter quasiroggenkampii
Brite
KEGG Orthology (KO) [BR:
equ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
equ03032
]
OM418_12285 (topA)
03400 DNA repair and recombination proteins [BR:
equ03400
]
OM418_12285 (topA)
Enzymes [BR:
equ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OM418_12285 (topA)
DNA replication proteins [BR:
equ03032
]
Prokaryotic type
DNA Topoisomerases
OM418_12285 (topA)
DNA repair and recombination proteins [BR:
equ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OM418_12285 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WFC80848
LinkDB
All DBs
Position
complement(2600525..2603122)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTSTKGAKKPK
KDERSALVNRMGVNPWHNWDAQYEVLPGKEKVVNELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDKRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDANVTTPGGDALPLQVSH
QNDKPFRPENRDQTMAAVALLEKARYQVLEREDKPTSSKPGAPFITSTLQQAASTRLGYG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESANQFASKEN
SQEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDELSLVELIPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEANFRELMNY
DFTAQMEDSLDQVASHQAEWKKVLDSFFSDFTDQLEKAEKDPEEGGMLPNQMVLTSIDCP
TCGRKMGIRTATTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCKKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELHRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggttaagtccagcgttggtcatatccgcgatttgccgaccagt
ggctcagccagcaaaaagagcgcagactctacctccaccaaaggggctaaaaagcctaaa
aaggatgaacgtagcgcgcttgtcaaccgcatgggtgttaacccttggcataactgggat
gcacagtatgaagtgcttccagggaaagaaaaagtcgttaacgagctgaagcagctggct
gaaaaagcagaccacatctatctcgcaaccgaccttgaccgcgaaggggaggccattgcg
tggcacctgcgggaagtgatcgggggtgatgacaaacgctacagccgcgtagtgtttaac
gaaattacgaagaatgcgattcgtcaggcgtttgagaagccgggcgagctgaatatcgac
cgcgtcaacgcccagcaggcgcgtcgctttatggaccgcgtcgtgggttacatggtttct
ccactgctgtggaagaaaattgcccgtggcctgtccgcaggtcgcgtgcaatccgtcgcc
gtgcgtctggtcgttgagcgtgagcgcgaaattaaagccttcgtgccggaagagttctgg
gaagttgatgccaatgtgaccacgccgggcggtgacgctctgccgctgcaggtaagccat
cagaacgataagcctttccgtccggaaaaccgcgaccagaccatggccgccgtggcgctg
ctggaaaaggcacgctatcaggtactggaacgtgaagacaaaccgaccagcagcaagcct
ggtgcgccgtttatcacctccaccctgcaacaggcggcaagcacccgtctgggttacggc
gtgaagaaaaccatgatgatggcccagcgcttgtatgaagcaggttacatcacctacatg
cgtaccgactcaaccaacctgagtcaggacgcggtcaacatggtgcgtggctacatcagc
gacaacttcggtaagaaatacctgccggaaagcgctaaccagtttgccagcaaagagaat
tctcaggaagcgcacgaagcgattcgtccttctgatgtctctgtgctcgctgaatcgctg
aaagatatggaagccgacgcgcagaagctgtatcagctgatctggcgtcagtttgtggcg
tgccagatgaccccggcccagtacgactccaccacgctgaccgttggggcgggtgatttc
cgtctcaaggcgcgcggtcgtattctgcgtttcgacggctggacgaaagtgatgcctgcg
ctgcgtaaaggtgatgaagatcgaacgctgcctgcggtgaacaaaggtgatgaactgtct
ctggttgagctgatcccggctcagcacttcaccaagccacctgcacgcttcagtgaagca
tctctggtaaaagagctggaaaaacgcggtattggccgtccgtcgacctacgcgtcaatt
atctcgacgattcaggatcgtggttacgtccgtgttgaaaaccgtcgtttctatgcggaa
aaaatgggtgagatcgtcaccgatcgtctggaagccaacttccgcgagctgatgaactac
gatttcaccgcgcaaatggaagacagtctcgaccaggttgccagccatcaggcggaatgg
aaaaaggtcctcgacagcttcttcagcgatttcaccgaccagcttgaaaaagcggagaaa
gaccctgaagagggcggcatgctgcctaatcagatggtactgaccagcatcgactgccca
acctgtggccgcaagatggggatccgtactgccaccacgggcgtgttcctcggctgctct
ggctatgcgctgtcgccaaaagagcgctgcaaaaccaccatcaacctggtgccggagaat
gaagttctcaacgtgctggaaggtgacgatgcggaaactaacgctctgcgtgccaagcgc
cgctgcaaaaaatgcggcacagcaatggacagctacctgatcgatccaaaacgcaagctg
cacgtgtgtggtaataacccaacgtgtgacgggtatgagatcgaagagggcgagttccgc
attaaaggctatgacggcccgattgtggagtgcgagaagtgtggttctgaaatgcacctg
aaaatggggcgtttcggtaagtacatggcctgcaccaacgacgaatgtaaaaacacgcgc
aaaattctgcgtaacggtgaagtggctccgccgaaggaagatccggttccgctgcctgaa
ttgccttgtgagaaatccgacgcgtacttcgtgctgcgtgacggcgcggcaggtgtcttc
ctggccgccaacaccttcccgaaatcgcgtgaaacccgcgcgccgctggtggaagaactg
catcgcttccgcgatcgtctgccggagaaactgcgttatctggccgatgcgccacagcag
gatccggaaggcaacaaaaccgtggtgcggtttagccgtaaaactaagcagcagtacgtt
gcggcagagaaagagggtaaagcgaccggatggtcagccttctttgtcgatggcaaatgg
gttgaaggcaagaaataa
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