Enterobacter quasiroggenkampii: OM418_13100
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Entry
OM418_13100 CDS
T09002
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
equ
Enterobacter quasiroggenkampii
Brite
KEGG Orthology (KO) [BR:
equ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
equ03016
]
OM418_13100 (rnd)
Enzymes [BR:
equ01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OM418_13100 (rnd)
Transfer RNA biogenesis [BR:
equ03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OM418_13100 (rnd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
WFC84832
LinkDB
All DBs
Position
complement(2773285..2774412)
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AA seq
375 aa
AA seq
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MNYQMITTNDELASLCEVTRDFPAIALDTEFVRTRTYYPQLGLIQMYDGKNVSLIDPLGI
TDWTPMRDLLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSGRPLSWGFAA
MVEEYTGLTLDKSESRTDWLARPLTARQLEYAAADVFYLLPIAGQLMKEAEASGWLPAAL
DECRMTQQRRQEVVDPKEAWRDISNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWAVARYMPGSLGELDSIGLSGSEIRFHGKTLLALVAKAQELPDDALPEPLLNLMDM
PGYRKAFKDIKALVQTVATESKLSAELLASRRQINQLLNWHWKLKPQNGVPEMMAGWRGE
LMADRLNTLLEGYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccagatgatcacgaccaacgacgagctggcttcgctgtgcgaagtgacgcgc
gactttcctgccattgccctggataccgagtttgtccgtacccggacgtactatccgcag
ctggggttgattcagatgtacgacggtaaaaacgtgtcgctgatcgaccctctcggcatt
accgactggacgccgatgcgcgacctgctgctcgataccgccgtcacgaaatacctgcat
gcaggcagtgaagatctggaagtctttctgaatacctttggcatcatgcctcagccgctg
attgatacgcagatcctcgcggcgttcagcggtcgcccgctctcatggggctttgccgcc
atggtggaggagtatacgggcctgaccctggataaaagcgaatcccgtaccgactggctg
gcgcgtccgcttaccgcccgccaactggagtatgcggcggctgacgtgttttacctgctg
ccgatcgccggacagctgatgaaagaggcggaagcctccggatggctcccggcagcgctg
gatgagtgccgtatgacccagcagcgtcgtcaggaagtggtggatccgaaagaggcctgg
cgcgacatcagcaacgcctggcagctgcgcacgcgtcagctggcatgcctgcagctgctg
gcagactggcgcttgcgtaaagcgcgcgagcgcgatctggccgttaactttgtcgtccgc
gaagaacatctctgggcggtggcgcgctatatgccgggcagccttggcgagctggacagc
attgggctttcgggcagtgagatccgtttccacggcaaaaccctgctggcgctggtcgca
aaagcgcaggaattacccgacgacgcgctgccggaaccgctactgaacctaatggatatg
ccgggctatcgcaaagcgtttaaagatatcaaagcgctggtgcagacggtggcaacggaa
agcaagctgagcgcggaactgctcgcctcacgccgtcagattaatcagctgctgaactgg
cactggaagctgaagccgcagaatggcgtaccggaaatgatggcgggatggcgcggggaa
ttgatggccgatcgcctgaatacgctcctggaaggttatccgcgataa
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