Enterobacter quasiroggenkampii: OM418_16635
Help
Entry
OM418_16635 CDS
T09002
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
equ
Enterobacter quasiroggenkampii
Brite
KEGG Orthology (KO) [BR:
equ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
equ03009
]
OM418_16635 (srmB)
Enzymes [BR:
equ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OM418_16635 (srmB)
Ribosome biogenesis [BR:
equ03009
]
Prokaryotic type
rRNA helicases
OM418_16635 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
DUF561
AAA_30
AAA_11
LuxC
CMS1
Motif
Other DBs
NCBI-ProteinID:
WFC81641
LinkDB
All DBs
Position
3543779..3545107
Genome browser
AA seq
442 aa
AA seq
DB search
MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGEAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEDALRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQIKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLL
QKIGRYVDEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSSAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcacttgag
agcaaaggctttacacgcccgaccgccattcaggcagcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctatttgctg
cctgtgttgcagcatctgctcgattttccacgtaaaaaatctggcccgccgcgtatttta
atcctgacgccgacgcgcgaactggccatgcaggtggccgatcacgcgcgtgaactcgcg
gcaaatacccatctggatatcgcgaccatcaccggcggcgttgcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggacatcgtcgttgcgacgacgggccgcctgctgcagtac
attaaagaagagaacttcgactgccgtgcggttgaaacgctgatcctcgacgaagccgac
cgtatgctggacatgggcttcgcacaggatatcgagcacattgccggggaaacgcgctgg
cgtaaccagacgatgctgttctctgccaccctcgaaggggaagcgattaaagacttcgca
gagcgtctgctggaagatccggtagaagtgtcggcgacgccgtccacccgtgagcgtaag
aagatccaccagtggtactaccgcgcggacaaccttgagcacaaagtcgaattgctcaaa
cacctgctgaagcaggaagatgcgctgcgcacaatcgtgtttgtccgtaagcgcgagcgc
gtgcatgagctggcagaaatgctgcgtaacgccgggatcaacaactgctatcttgaaggc
gagatggcgcagatcaagcgtaccgaaggcattaagcgcctgaccgatggccgcgttaac
gtgctggttgccacagacgttgccgctcgcgggatcgacatccctgacgtcagccacgtc
attaacttcgatatgccgcgcagcggcgatacctatctgcaccgtattggccggaccggc
cgcgcgggccgcaaagggattgcgatttcactggtcgaagcgcatgactacctgctgctg
cagaaaattggccgctatgttgacgagccgctgaaagcgcgggttattgatggcttgcgc
ccaaccacacgtgcgccgagtgaaaaaatgacgggtaagccgtccaagaaagcgctcgcg
aaacgtgctgagagaaaagagaaagaaaaagagaaaccacgcgtgaagcagcgccaccgc
gacaccaaaaatattggtaagcgccgtaagccaagctctgccgcaccagagacaaaaacg
gaagagtaa
DBGET
integrated database retrieval system
