Enterobacter quasiroggenkampii: OM418_19575
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Entry
OM418_19575 CDS
T09002
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
equ
Enterobacter quasiroggenkampii
Pathway
equ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
equ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OM418_19575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
equ03019
]
OM418_19575
03009 Ribosome biogenesis [BR:
equ03009
]
OM418_19575
Enzymes [BR:
equ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OM418_19575
Messenger RNA biogenesis [BR:
equ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OM418_19575
Ribosome biogenesis [BR:
equ03009
]
Prokaryotic type
rRNA helicases
OM418_19575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WFC82175
UniProt:
A0ABY8E2J4
LinkDB
All DBs
Position
complement(4148109..4150004)
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR
GGEGRRFSGERRESRGPRREEGTNRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcgttc
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgttctg
gctccaacccgtgaactggctgttcaggttgcagaagccatgacggaattctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtaccctggacctctctaaactgagcggtctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccattatggcgcagatcccggacggt
catcagaccgcgctgttctctgcaaccatgccggaagctatccgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgtattcagtccagcgtaaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgtaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgactctggaa
gtggctgaagccctggagcgtagcggctacaacagcgcagcgctgaacggcgatatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gccaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgaccattccagaagcggacctgccaaacgcagagctgctgggc
aaacgccgtctggaaaaattcgccgccaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgcgcgctgctgtcgcagattcagcctgttgctgaaggcgaagagctggac
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccaccagatgcgccgatgcgtcctaaacgtgaattccgtgaccgtgacgatcgcttcgaa
cgtcgtggcgaccgtaacgatcgtggcccacgtggtgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgtgaacgtcgcgacgcaggtgacatggaactgtaccgcattgaagtg
ggtcgtgatgatggcgttgaagttcgtcacatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacatcggtaacatcaagctgttcgcatcccactctactatcgagctg
ccaaaaggcatgccgggtgaagtactgcagcactttacgcgtacccgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgcacagccacgtcctgaccgtggcggcgaacgc
cgtggtggtggtcgcggtttcggcggcgagcgtcgtgaaggcggccgcagcgaaggtcgc
ggtggtgaaggtcgtcgtttctccggcgagcgccgcgaaagccgtggtccacgtcgtgaa
gaaggcaccaaccgtcgtcgtttcggtgacgcgtaa
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