Enterobacter quasiroggenkampii: OM418_19780
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Entry
OM418_19780 CDS
T09002
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
equ
Enterobacter quasiroggenkampii
Pathway
equ02020
Two-component system
equ02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
equ00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OM418_19780 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OM418_19780 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
equ03021
]
OM418_19780 (rpoN)
Transcription machinery [BR:
equ03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OM418_19780 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Baculo_19
Motif
Other DBs
NCBI-ProteinID:
WFC82213
LinkDB
All DBs
Position
4186374..4187807
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALDSNPLLEQTDLHDEVDTQQ
SQDTEALDTADALEQKEMPDELPLDASWDEIYTAGTPSGTRADYQDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVTLDDILESMGDDEIELEEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFSKETPWLDEARVIISDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTSEPEYVIPDVLVRKNNGRWVVELNSDSIPRLQIN
QQYASMCTSVRNDSDNQYIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaattaaggctcagccaacaactggcgatgacgccgcagctacag
caggcaattcgcctgttgcaactgtccacgttagaacttcagcaggagctccagcaggcg
ctggacagcaaccccctgctggaacaaaccgatcttcatgacgaggtagatacccagcaa
tcgcaggatacagaagcgctcgataccgcggatgcactcgaacaaaaagagatgcccgac
gagcttccgctggatgccagctgggatgaaatctacaccgccggcaccccttccggtacg
cgtgcagactaccaggacgatgagctaccggtctatcagggagaaaccacccagtcgctg
caggattacctgatgtggcaggtggaactcacccccttctccgataccgaccgcgcgatt
gccacgtcaattgtcgatgccgttgacgacaccggctatttgaccgtcacgctggacgat
attctggaaagcatgggcgacgacgagattgagcttgaggaagttgaagctgttctgaag
cgcatccagcgtttcgatccggtaggcgtagccgcaaaagatctgcgcgactgcctgctg
atccagctttctcagttcagcaaagagacgccatggctcgacgaggcgcgcgtgatcatc
agcgatcatcttgatctgctggcgaaccacgatttccgcaccctgatgcgcgtcacgcgc
ctgaaagaagaggtgctgaaagaagcggtgaatctgatccagtcgctcgatccgcgcccc
ggtcagtcgatccagaccagcgaacccgagtacgtgatcccggatgtgctggtcagaaaa
aataacggccgctgggtcgttgaactgaactctgacagtatccctcgcctgcaaatcaac
cagcagtatgcctccatgtgcaccagcgtgcgtaacgactccgacaatcaatatattcgt
agcaatttgcaggaagcgcgatggctgatcaaaagtctggagagccgaaatgatacgctg
ctacgcgtcagccgctgcattgtcgaacagcagcaggcgttctttgagcagggtgaagag
tatatgaaaccgatggtgctggcggatatcgcccaggccgtcgagatgcatgaatcaact
atttcccgtgtcaccacgcagaagtatctgcacagtccacgcggtatttttgagcttaag
tatttcttctccagccatgtgaataccgagggcggcggcgaagcgtcgtccacggccatc
cgtgccctggtgaagaagttgatcgccgcggagaatcccgcgaagccgctaagcgacagt
aagttaaccaccatgctgtccgatcagggtattatggtggcacgtcgtactgttgcgaag
tatcgagagtctttatccattccgccgtccaaccagcgtaaacagctggtctga
DBGET
integrated database retrieval system