Enterobacter quasiroggenkampii: OM418_21190
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Entry
OM418_21190 CDS
T09002
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
equ
Enterobacter quasiroggenkampii
Pathway
equ00071
Fatty acid degradation
equ00280
Valine, leucine and isoleucine degradation
equ00310
Lysine degradation
equ00362
Benzoate degradation
equ00380
Tryptophan metabolism
equ00410
beta-Alanine metabolism
equ00640
Propanoate metabolism
equ00650
Butanoate metabolism
equ00907
Pinene, camphor and geraniol degradation
equ00930
Caprolactam degradation
equ01100
Metabolic pathways
equ01110
Biosynthesis of secondary metabolites
equ01120
Microbial metabolism in diverse environments
equ01200
Carbon metabolism
equ01212
Fatty acid metabolism
Module
equ_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
equ00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OM418_21190 (fadB)
00650 Butanoate metabolism
OM418_21190 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
OM418_21190 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OM418_21190 (fadB)
00310 Lysine degradation
OM418_21190 (fadB)
00380 Tryptophan metabolism
OM418_21190 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OM418_21190 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OM418_21190 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OM418_21190 (fadB)
00930 Caprolactam degradation
OM418_21190 (fadB)
Enzymes [BR:
equ01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OM418_21190 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OM418_21190 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OM418_21190 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
OM418_21190 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WFC82467
LinkDB
All DBs
Position
4478781..4480970
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLNWLEDGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQPELKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQAQK
IGLVDGVVKPEKLVEGALAILRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
MQTAGKHYPAPITAVKTIEAAARLGRDEALKLENQSFVPLAHTNEARALVGIFLNDQFVK
GKAKQLTKNVETPKHAAVLGAGIMGGGIAYQSAWKGVPVVMKDINEKSLTLGMTEAAKLL
NKQLERGKIDGLKLAGVISTIQPVLEYSGFDRVDVVVEAVVENPKVKKAVLAETEDKVRP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSEDTIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKP
KKEEDAAVDSLLADVSQPKRDFTDDEIIARMMIPMINEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSARYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPAVEPA
RPVGELKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgacaccctgtacctcaactggctggaagatggcattgccgaactg
gtgttcgatgcccccggctcagtgaacaagcttgataccgcgacggtggccagtcttggc
caggcgctggatgttcttgaaaaacaacctgaattaaaagggctgctgctgcgttcgaac
aaagcggcctttatcgtcggtgccgatatcaccgagttcctttcgctgttcctggtgccg
gaagaacagctgagccagtggctgcactttgccaacagcgtctttaatcgtctggaagat
ctgcctgtcccgactatttccgccgttaacggctatgcgctgggcggtggctgcgagtgc
gtgctggcgaccgactatcgcctggcgacgccggacctgcgcatcggcctgccggaaacc
aagctgggcattatgccgggctttggcggctccgtccgtatgccgcgcatgctcggtgcc
gacagcgcgctggagatcattgccgcgggtaaagatgtcggcgcagaacaggcgcagaaa
attggcctggtcgacggcgttgtaaaacctgagaagcttgttgaaggcgcactcgccatt
ctgcgtcaggcgattaacggcgatctcgactggaaagccaaacgccagccgaagctggaa
ccgttaaaactcagcaagattgaagccgccatgagcttcaccatcgccaaaggcatggtg
atgcagacggcgggtaaacactacccggcgccaatcacggcggtgaaaaccatcgaagcg
gctgcccgtctcggacgcgatgaagcgctgaagctcgaaaatcagagctttgtcccgctg
gcgcacaccaatgaggctcgtgcgctggtcggtatcttcctgaacgatcagtttgtgaaa
ggcaaagccaaacagctgaccaaaaacgttgagacgccaaaacatgcggcggtactcggc
gcgggcattatgggtggcggcatcgcttaccagtcagcctggaaaggcgtgccggtggtg
atgaaagacatcaacgagaaatccctgacgctgggcatgaccgaagcggccaagctgctg
aataaacagcttgagcgcggcaaaattgacggtctgaagcttgcaggcgtgatttccacc
attcagcccgtgctggaatacagcggttttgatcgtgtcgacgtggtggtcgaagccgtc
gtcgagaacccgaaggttaaaaaagcggtgctggcggaaacagaagacaaggttcgcccg
gataccgtgctggcctctaacacctccactattccaatcagcgaactggcgagcgtgctg
aagcgtccggaaaacttctgcggtatgcacttcttcaacccggtacaccgtatgccgctg
gtcgaagtgatccgtggggaaaaaacctctgaggacaccatcgccaaagtggtggcctgg
gccagcaagatgggcaaaacgccgatcgtcgttaacgattgtccgggcttctttgtcaac
cgcgtgctgttcccttatttcgccggttttagccagctgctgcgcgacggcgcggacttc
cgcaaaatcgacaaagtgatggaaaaacagttcggctggccgatgggaccggcgtatctg
ctggacgttgtgggcattgataccgcccaccacgcccaggcggtaatggcggcaggcttc
ccgcagcgcatgcagaaagactatcgcgacgcgattgacgcgctgttcgacgctaaccgc
ttcggtcagaaaaacggtctgggcttctggcgctataaagaagacagcaagggcaaaccg
aagaaagaagaagacgcggcggtggatagcctgctggccgatgtcagtcaaccgaaacgc
gacttcaccgacgatgagatcatcgcccgcatgatgattccgatgatcaacgaagtggtg
cgttgcctcgaagaaggcattatcgccagcccggcggaagcggatatggcgctggtatac
ggcctgggcttccctccgttccacggcggcgcgttccgctggctggacacgctcggcagc
gcccgctatctcgatatggctcagcagtatcagcacctcggcccgctgtatgaagtgccg
gaagggctgcgtaacaaagcgcgccataacgaaccctactatcccgcagttgagccagcc
cgtccggttggcgagctgaaaacggcttaa
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