Agathobacter rectalis M104/1: ERE_04050
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Entry
ERE_04050 CDS
T02588
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
era
Agathobacter rectalis M104/1
Pathway
era03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
era00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ERE_04050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
era03400
]
ERE_04050
Enzymes [BR:
era01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ERE_04050
DNA repair and recombination proteins [BR:
era03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ERE_04050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CBK92506
LinkDB
All DBs
Position
358241..359107
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AA seq
288 aa
AA seq
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MSDIKLGCHVGMAGKDMFLASASEAASYGANVFMLYTGAPQNTRRKEIFELNIDAGWEYA
HEHGINEIVVHAPYIINLANTVKPETYELAVEFLEKEIVRTAAMKSRILVLHPGSHVNAG
EQAGIAQIVKGLNTVLNQNDDDVFIALETMAGKGSEIGRSFEELKAIYDGVDRKERLRVC
FDTCHVNDAGYDIVNHYDDVFAEFDRVIGLEQIAVFHVNDSLNPLGAHKDRHANIGKGTI
GYDTLHRLVHDETFANVPKILETPWLCEESSAKKTIPPYKEEIEWLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatataaaattaggctgtcacgtaggcatggcaggaaaagatatgtttctggca
tcagccagtgaagcagcatcatacggcgcgaatgtgtttatgctctacaccggggcacca
cagaacacgagaagaaaggaaatctttgagctcaacatagacgcaggctgggaatatgca
catgagcatgggataaatgagatagtggtccacgcgccatacatcataaatctggcaaac
accgtaaagcctgagacatacgagctggcagtggagtttctggaaaaggagatagtaagg
accgcggcaatgaagagccgcatactggtgcttcatccgggaagtcatgtaaatgccggt
gagcaggctggaatcgcacagattgtaaagggacttaacacagtgctcaatcagaatgat
gacgatgtgtttatcgcacttgagacgatggcaggaaagggcagtgaaataggccgttcc
tttgaggagcttaaggcaatctatgatggagtggacaggaaggaaaggctgcgtgtctgc
tttgatacgtgccatgtaaatgatgcaggatacgatattgtgaaccattatgatgatgtt
tttgcggagtttgacagggtgataggacttgagcagatagcggtatttcatgtgaatgac
agcttaaatcctctcggagcacacaaggacaggcatgcaaatataggcaagggaaccatc
ggctatgacacactgcaccgcctggtgcatgatgagacctttgcaaatgtaccaaagatt
ctggaaacaccatggctttgtgaggagagctctgcgaagaagactattcctccttataaa
gaggaaattgaatggcttcttaaataa
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