Agathobacter rectalis M104/1: ERE_06260
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Entry
ERE_06260 CDS
T02588
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
era
Agathobacter rectalis M104/1
Pathway
era03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
era00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ERE_06260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
era03400
]
ERE_06260
Enzymes [BR:
era01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERE_06260
DNA repair and recombination proteins [BR:
era03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ERE_06260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
SLFN-g3_helicase
Zn_ribbon_6
Methyltransf_28
AAA_19
zf-CHY
PIF1
MerR
DUF2321
ADDB_N
DUF1272
TrwB_AAD_bind
nSTAND_NTPase5
DZR
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
CBK92706
LinkDB
All DBs
Position
complement(600998..603259)
Genome browser
AA seq
753 aa
AA seq
DB search
MYANVIVDISHEKLDKTFQYSIPDELLCDIRPGVCVDIPFGSRTITGYVIEVTDKPEYDP
ARTKPLIGIKADSVAVEAKLIALAAWIRRNYGSTMNQALKTVIPVKKQAKEQVSRSIALK
IDKVKARAQLALCEAKKQKAKARLFRALIDADDGARLEYSFVTGKLSVSAATIRALEQSG
FIEVITQTGYRNPVEHMSVDTYDKVLNAAQQSVVDAIEGDIAAGLRNTYLIKGVTGSGKT
EVYMELIAHCIQSGRQAIVLIPEIALTYQTVMRFFARFGNRVSIINSRLSNGERYDQFER
AKNGDIDIMIGPRSALFTPFSNLGLIIIDEEHENSYKSESVPRYHAREVAIEYARMSDAI
VVLGSATPSVDSYYKAKTGVYRLLELDKRVDDRPLPKCEVVDLRQELLEGNRSILSTRLQ
ELMEERLLNGQQTMLFLNRRGKSAFMSCRACGFVVKCPHCDVSLSEHSGGVMVCHYCGYR
QPVPKVCPSCGSKYISGFKAGTQKIEAMVAKRFPQARILRMDYDTTRAKDAYEKILQAFS
NHEADILIGTQMIVKGHDFSNVTLVGVLAADMSLHVNDFHAAERTFALLTQAAGRAGRGK
LPGNVVIQTYDPDHYAIRTAKEQDYEAFYDKEIEYRRLMNYPPVWNMLLVHVTSPDENEC
GSMAQQVYDIASQMISHTDENQSPDDRNLIQLIGPADATIAKVNDIYRKVIYMKTSDYAA
LISIKDGIEQAVKADTVMKHANISFDFNPMSGF
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccaacgtgattgtggatatatcccacgaaaaactggataagacatttcagtac
agcatcccggatgagcttttatgcgacatccgtccgggtgtgtgcgtggatattccattt
ggcagccgcactatcacaggctatgtgattgaggtcacggataagcctgagtacgacccg
gcacggacaaagcctcttatcgggataaaggcagactctgtggctgtggaggcaaagctc
atcgcacttgcggcatggatacggcgcaattacggctctaccatgaatcaggcacttaag
actgttatacctgtaaagaagcaggctaaggagcaggtgagccgcagtattgcactgaaa
atagacaaggtaaaggcaagggcgcagcttgcgctttgcgaggcaaaaaaacaaaaggca
aaggccaggctttttcgtgcgctgattgatgctgatgatggggcgcgccttgagtattcc
tttgtgacaggcaagctgtcggtgtcggctgccactataagagcgcttgagcagagcggt
tttatcgaggtcatcacacagaccggctacagaaatcctgtggagcatatgagtgtggac
acctatgataaggtactgaatgctgcgcagcagagtgtggttgatgcgatagaaggcgac
attgccgctggccttagaaatacttatctgattaagggtgtcaccggaagcggtaagaca
gaggtgtacatggagcttatcgcacactgtatacagtccgggcgtcaggcgattgtgctg
attcccgagattgccctcacttaccagaccgtgatgcgtttttttgccagatttgggaac
agggtttcgataatcaattcaagactttcaaatggtgagcgttatgaccagtttgagaga
gctaagaatggtgatattgacatcatgattggcccgcggtctgcgctgttcacacctttt
tcaaatttaggacttatcataatagatgaagagcacgagaattcatacaagagcgagtcg
gtgccacgctatcatgccagggaagtggcgatagagtatgcgcgcatgtccgatgctatt
gtggtacttggctctgcaacaccgtcggtggatagctattacaaggcaaagacaggtgtt
tacaggcttttggagctggataagcgtgtggacgacaggcctcttccaaagtgtgaggtt
gtcgatttgaggcaggagcttcttgagggaaaccgctcgattctttccaccaggcttcag
gagcttatggaggagcggcttctaaatggccagcagaccatgctttttttaaatagaagg
ggcaaatcggcatttatgtcgtgcagagcgtgcggttttgtggtaaaatgtcctcattgc
gatgtatcactcagtgaacatagcggcggagtgatggtctgtcactactgcggctacaga
cagccggtgcctaaggtgtgtccgagctgtggctcgaagtacattagcggctttaaggcc
ggcacacagaagatagaggcgatggtggcaaagcgttttccacaggcacgtatactgcgc
atggattatgacaccacgagggcgaaggatgcgtatgagaagattctgcaggcattttcc
aatcatgaggccgatatacttatcggtacgcagatgattgtaaaggggcatgatttttca
aatgtcactttggttggtgtgctggcggcggatatgtcactgcatgtgaatgattttcat
gcggcggagcgcacctttgctctgctgacccaggcggcagggcgcgccggcagaggaaag
ctgcccggcaatgttgttatccagacctacgaccctgaccactatgccatccggactgcc
aaagagcaggattatgaggctttttacgataaggagatagagtacaggaggcttatgaac
tatccacctgtatggaatatgcttttagtccatgtcacatcacctgatgagaatgagtgc
ggcagcatggctcagcaagtgtacgatatagcgtcgcaaatgatatcgcatacagatgaa
aatcaaagcccggatgataggaatctgattcagctcatcggtcctgcggatgcgaccatc
gccaaggtgaatgacatataccgcaaggtgatttacatgaagacatctgactatgcggcg
ctcatttccataaaggatggaatagagcaggctgtgaaagctgatacggtaatgaaacat
gctaatatctcatttgatttcaatccgatgagtggattttga
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integrated database retrieval system
