Agathobacter rectalis M104/1: ERE_10530
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Entry
ERE_10530 CDS
T02588
Name
(GenBank) uncharacterized domain HDIG
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
era
Agathobacter rectalis M104/1
Brite
KEGG Orthology (KO) [BR:
era00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
era03019
]
ERE_10530
Messenger RNA biogenesis [BR:
era03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ERE_10530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
CBK93087
LinkDB
All DBs
Position
complement(1086614..1087558)
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AA seq
314 aa
AA seq
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MKYISTLREGERINEIFLCKSKQTAMTKSGKPYDNVILQDKTGTLDAKIWDVGSVGIEEF
DAMDYIAITGDITSFQGNLQCSIKRARKVNEGEYDPADYLPVSDKDVEVMYKELMGFIGS
VKNQYLSQLLHSFFDNKEFERRFKFHSAAKSVHHGFVGGLLEHTLGVTKNCDYFAKMYPV
LNRDLLLTAAIFHDIGKLKELSTFPENDYTDAGQLLGHIMIGAEWVGDAIKSIDGFPVVL
ANELKHCILAHHGELEFGSPKKPALVEALALSFADNIDAKMETFRELLVNVPENDTKWQG
YNRFMETNFRRTSV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatatttcaactctccgcgagggagagagaatcaatgagatttttttatgcaag
agcaagcagacagccatgaccaaaagcggaaagccttatgacaatgttatcctgcaggat
aagacaggcacgctggatgccaagatatgggatgtgggctcagtaggcattgaggaattt
gatgcaatggattacatagccataaccggtgatatcacaagctttcagggcaatttgcag
tgttccataaagcgtgcgagaaaggtgaacgagggagaatatgaccctgcggattatctg
ccggtcagcgataaggatgtcgaggtcatgtataaggaacttatgggctttatcggctct
gtaaagaatcaatacctgtcacagctcttacatagcttttttgacaataaggagtttgag
cgccgtttcaagttccattcagccgcaaagagcgtgcaccacggctttgtaggaggtctt
ttggagcatacactcggtgtgacgaagaactgtgattattttgcaaaaatgtatccggtc
ttaaaccgtgacctgcttcttacagcagctattttccatgatatcggaaaattaaaggag
ctttctactttcccggagaatgactatacagacgctggtcagctcctcggacatatcatg
attggtgcagagtgggtaggcgatgcgattaagagcatcgacggcttcccggtagtgctc
gcaaacgagctgaagcactgcatacttgcccaccacggcgagcttgagtttggctctccg
aaaaagccggcacttgtcgaggcactggcacttagctttgcagacaacatagatgccaag
atggagaccttcagagagctgcttgtaaatgtgcctgaaaacgatacaaagtggcagggc
tacaacagatttatggagacaaatttccgcagaacaagtgtgtaa
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