Agathobacter rectalis M104/1: ERE_12470
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Entry
ERE_12470 CDS
T02588
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
era
Agathobacter rectalis M104/1
Brite
KEGG Orthology (KO) [BR:
era00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
era03009
]
ERE_12470
Enzymes [BR:
era01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ERE_12470
Ribosome biogenesis [BR:
era03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ERE_12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
PrmA
Methyltransf_4
N6_N4_Mtase
UPF0020
Saf-Nte_pilin
Methyltransf_12
DUF4712
RrnaAD
Methyltransf_23
RsmJ
Motif
Other DBs
NCBI-ProteinID:
CBK93248
LinkDB
All DBs
Position
complement(1290225..1291481)
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AA seq
418 aa
AA seq
DB search
MAGNQGNSRKKTTHNMHNEKKYKNPAGQERVREKSSRAKSDNVCPYAKKCGGCDYQGVEY
KEQLKTKQAYMKKLLKPFCFVEPIVGMKNPLYYRHKVHAAFDCTRRGQIVAGAYRKNTHD
VVDIESCMIEEQESDEIIRDIKDMLRSFRIKTYDEDTGYGLLRHVLVRKGYATGQIMVVL
VLASPILPSKNNFVKALRKKHPNITTVVLNVNDKRTSMVLGDRNITLYGKGFIEDKLCGC
TFRISPGSFYQVNPVQTELLYEKAIHEAHLTGKERVIDAYCGTGTIGIIAAKNAGEVIGV
ELNRDAIRDAVINAKRNDIRNIRFYNDDAGKFMVEMAQKGEKADVVIMDPPRTGSDEAFL
SSVVKLSPERVVYVSCGPETLARDLKYLTKHGYAVKRATPYDCFPYTEHIETVVLLCR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaatcaaggcaattccagaaaaaagaccacgcataacatgcacaatgagaaa
aaatacaaaaaccctgcaggacaggagagggtaagggaaaaaagcagccgggcaaaaagc
gataacgtatgtccgtatgcgaagaaatgtggcggctgcgactatcagggcgtagaatat
aaggaacagttaaaaaccaagcaggcatacatgaaaaagctgctaaagcctttttgcttt
gtggagccgattgtcggcatgaaaaatccgctctattatcgtcacaaggttcatgcagcc
tttgactgtacgaggcgcggtcagattgtggcgggagcctacaggaaaaacacacatgat
gtggtggatatcgaaagctgcatgatagaggagcaggagtcagatgagataataagggac
ataaaggatatgctccgctcattcaggataaagacctatgatgaggacaccggctatggc
cttctcagacatgtgcttgtaagaaagggttatgcaacagggcagataatggtagtgctt
gtcctggcatcgccgatacttccatcgaagaacaatttcgtaaaagcactcaggaagaag
catcccaatatcacgacagtggtgctcaacgtgaatgataaaagaacaagcatggtgctc
ggagacagaaacatcacgctttatggcaagggcttcatagaggataagctgtgcggctgt
accttccgcatctcaccaggctcgttttatcaggtgaatccggtacagacggagctttta
tacgaaaaagccattcatgaggcacacctcaccggcaaggagcgcgtaatcgatgcatac
tgcggcaccggaaccataggcatcatagcagcgaaaaatgcaggtgaagtcatcggtgtc
gagctaaaccgtgatgcaatccgtgatgcagtcatcaatgcaaagcgaaacgacatcaga
aatatccgcttctacaatgatgatgccggaaaattcatggtcgagatggcacaaaagggt
gagaaagctgatgttgtcataatggatcctccaagaaccggcagcgacgaggcattttta
tcatcggttgtcaagttgtcgccggagagagtggtgtatgtgtcatgtggtccggaaaca
ctggcgagggatttaaagtatctcacaaagcatggatatgcagtgaagcgtgcaacacca
tatgactgcttcccatatacagagcacatagagactgtggtgttactttgcaggtaa
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