Agathobacter rectalis M104/1: ERE_15850
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Entry
ERE_15850 CDS
T02588
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
era
Agathobacter rectalis M104/1
Brite
KEGG Orthology (KO) [BR:
era00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
era03019
]
ERE_15850
03009 Ribosome biogenesis [BR:
era03009
]
ERE_15850
03036 Chromosome and associated proteins [BR:
era03036
]
ERE_15850
Enzymes [BR:
era01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ERE_15850
Messenger RNA biogenesis [BR:
era03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ERE_15850
Ribosome biogenesis [BR:
era03009
]
Eukaryotic type
90S particles
RNase
ERE_15850
Prokaryotic type
rRNA processing factors
ERE_15850
Chromosome and associated proteins [BR:
era03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ERE_15850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CBK93540
LinkDB
All DBs
Position
complement(1621948..1622631)
Genome browser
AA seq
227 aa
AA seq
DB search
MADLNEFQSKIGYTFKNRHLLEQALTHSSYANEKHMKKHSDNERLEFLGDAVLEIVSSEF
LFINYPQKPEGELTKLRASIVCEPTLALCTKPLDLGKYLRLGRGEDHTGGRKRKSILSDA
LEAVIGAIYLDGGFTNAKEFVLRFIMTDIENKQLFYDSKTILQELIQGRHEQLSYELIDE
SGPDHDKQFTVAVLVDGERVSEGEGHTKKAAEQQAAYQALLLYRNRE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttaaatgaatttcaaagcaaaataggctatacgttcaagaaccgacatctg
cttgagcaggcgctgacacacagctcgtatgccaatgaaaagcacatgaaaaagcattct
gataacgaacgtctggagtttttgggcgatgctgttttggaaatagtttcaagtgagttt
ttgtttatcaattatccgcaaaagcctgagggtgagcttaccaagctgcgcgcaagcatt
gtttgtgagccgactcttgcactttgtacaaagccacttgaccttggaaagtacttacgt
cttggcaggggcgaggatcatacagggggcagaaagagaaaatcgattctttctgatgca
cttgaggcagtgattggagcaatttatttagatggtggttttactaatgcaaaggagttt
gtgcttaggtttatcatgactgatattgagaataagcagctcttttatgatagcaagact
atccttcaggagcttatacagggcagacacgagcagctttcctatgaacttattgatgag
agcggtccggaccatgacaagcagtttacagttgctgtgcttgtggacggcgagcgtgtc
agcgagggagaaggccacacaaagaaggcggcggagcagcaggctgcatatcaggcactt
cttttgtacagaaacagggaatag
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