Agathobacter rectalis M104/1: ERE_16080
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Entry
ERE_16080 CDS
T02588
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
era
Agathobacter rectalis M104/1
Pathway
era00300
Lysine biosynthesis
era00470
D-Amino acid metabolism
era01100
Metabolic pathways
era01110
Biosynthesis of secondary metabolites
era01120
Microbial metabolism in diverse environments
era01230
Biosynthesis of amino acids
Module
era_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
era00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ERE_16080
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ERE_16080
Enzymes [BR:
era01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ERE_16080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
VirK
Pro_racemase
DLIC
KH_PARP14_3
Motif
Other DBs
NCBI-ProteinID:
CBK93563
LinkDB
All DBs
Position
complement(1642786..1643643)
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AA seq
285 aa
AA seq
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MKFTKMHGCGNDYVYVNLFEEKLDDPARVSIYVSDRHFGIGSDGLITIGPSGKADFRMRI
YNADGSEAEMCGNGIRCVAKYVYDHKLTDKTEISVETGAGIKYLTLYVEENKVSQVRVDM
GEPILTPGDIPVVKADGSAYSDDYRVIDEPISAGNREWHMTCVSMGNPHAVVFVDDVAGF
ELEKYGPLFENHKMFPKRTNTEFVEILSRNEAKMRVWERGSAETWACGTGTCATVMACIL
NKKTDNKVLVHLRGGDLTIEYIPETNHVFMTGPATEVFSGEIDII
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacaaaaatgcacggctgtggaaatgattatgtatatgtaaatctttttgag
gagaagttggatgacccggcaagggtgtcaatatatgtcagtgacaggcattttggaata
ggctcagacggactaatcacaataggtccgtcaggcaaggctgattttagaatgaggata
tataatgcagacggttcggaagccgagatgtgcggaaacggcatacgctgcgtggcgaaa
tacgtgtatgaccacaaacttactgacaagactgaaatatcggttgagacaggagcaggc
atcaagtaccttacactatatgttgaggaaaataaggtatcacaggtgcgcgtggatatg
ggtgagcctattctgacgcctggggacattccggttgttaaagcagacggaagtgcttat
agtgatgactacagggtaatagatgagccgatttcagcaggcaatagagagtggcacatg
acctgtgtttcaatgggaaatcctcatgcggtagtgtttgtcgatgatgtggcaggtttt
gagcttgagaaatacggtccgctttttgagaatcataagatgtttccaaagcgcaccaac
acggagtttgtagagatactttcaaggaatgaggcgaaaatgagagtatgggagaggggc
agcgctgagacatgggcctgcggtacaggaacctgtgcgaccgtcatggcatgtatactc
aacaaaaagactgacaacaaggtgcttgtgcatctaaggggcggagatctgactatcgag
tatatacctgaaaccaatcatgtgtttatgactggccctgctactgaggttttctcagga
gaaattgatatcatataa
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