Agathobacter rectalis M104/1: ERE_17740
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Entry
ERE_17740 CDS
T02588
Name
(GenBank) Superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
era
Agathobacter rectalis M104/1
Pathway
era03420
Nucleotide excision repair
era03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
era00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERE_17740
03430 Mismatch repair
ERE_17740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
era03400
]
ERE_17740
Enzymes [BR:
era01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERE_17740
DNA repair and recombination proteins [BR:
era03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERE_17740
MMR (mismatch excision repair)
Other MMR factors
ERE_17740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Homoserine_dh
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
CBK93708
LinkDB
All DBs
Position
complement(1809230..1811521)
Genome browser
AA seq
763 aa
AA seq
DB search
MNLDMLNEQQREAVLTTEGPLLILAGAGSGKTRVLTYRTAYLIDECGVNPYNIMAITFTN
KAAGEMRERIDDMVGYGSESIWVSTFHSTCVRILRRYIDRLGYDTNFTIYDADDQKALMK
DICKRLEIDTKMYKEKMFLNVISSAKDEMIDPIEFENRFTGDFVKRKQALVYKEYQNALK
QNNALDFDDLLVKTVELFKLDKEVLDYYQERFRYIMVDEYQDTNTVQFELIRLLAMKYKN
LCVVGDDDQSIYKFRGANIYNILNFEKHFEDAKVIKLEQNYRSTQNILDAANSVISNNVG
RKDKRLWTDNGAGDRITFEQLESGFEEADYVARSIARLVRKGEARYKDCAVLYRTNAQSR
LFEEKFIAANIPYKIVGGVNFYARKEIKDILAYLKTIDNGHDDLAVKRIINVPKRGIGAT
SINKVTDYAIEKGIDFYTALRYVDEVPGMARSAGKIKPFVMFIQSLRARAEMDSVSQLIQ
AIIDETGYVDELKAEGTDEAEQRIENIDELINKAVDYEQGEENPTLSGFLEEVALVADID
GLDENSDYVVLMTLHSAKGLEFPNVYLAGMEDGLFPSYMSITSDDATSEIEEERRLAYVG
ITRAKEHLTITSARMRMVRGETQFNKVSRFVKEIPRELMSGEVYEPKRRDDDLERNSQST
YRKAKEAFKKTPTYGTEYATTFNTQRTRTPVYTPVSNQKSFASANTTGGLSYKVGDRVSH
IKFGAGEVMAIVEGGRDYEVTVDFDKAGTKKMFASFAKLKKID
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagatatgttgaatgaacagcaaagggaggccgttttgaccacagagggaccg
cttcttattttagcgggggcaggcagtggcaagaccagggttcttacatacaggactgcc
tacctgatagatgagtgtggcgtcaatccttacaatatcatggcaatcacctttacaaac
aaggctgcgggagagatgcgtgagagaattgatgatatggtgggctatggttcggaaagc
atatgggtttctacattccattcgacatgtgtgcgtatactgcgcaggtatattgacagg
ctgggatatgacacgaattttaccatatatgatgctgacgaccagaaggctctgatgaag
gacatctgcaagcgtcttgagatagataccaagatgtataaggaaaagatgtttttaaat
gtcatttcatctgcaaaggatgagatgattgatccgatagagtttgaaaaccgcttcaca
ggtgacttcgtgaagcgcaagcaggcacttgtatacaaggagtatcagaatgccctaaag
cagaataacgcactcgattttgatgatttgcttgtgaagacagtagagctttttaagctg
gataaagaggtgctggattactatcaggagcgcttcagatatatcatggtggatgagtat
caggacacaaacaccgtgcagtttgagcttatcaggcttcttgccatgaagtataagaat
ctgtgtgtggttggtgatgatgatcagtccatttacaagttcagaggtgccaatatctac
aatatcttaaactttgagaagcattttgaagatgcaaaggtcataaagcttgagcagaat
tacaggtctacccagaatatcctagatgccgccaacagcgtcatttccaacaacgtgggt
agaaaggacaagcgcctttggactgacaacggagccggagacaggattacctttgaacag
cttgagagtggcttcgaggaagcggattatgtggcgcgttcgatagcgagactcgtgaga
aagggtgaggcgcgctataaggactgtgctgtgctttaccgaaccaacgcacagtcgcgt
ctcttcgaggagaaatttattgcagccaacataccatacaagattgtcggcggcgtgaat
ttctatgccagaaaagagataaaggatatccttgcatatttaaagactattgacaatggc
catgatgaccttgcggtaaagcgaataataaatgtgccaaagcgcggcatcggagctaca
agcatcaataaggtgacagactatgccattgagaagggaatagatttctatacggcactg
cgctatgtcgatgaggtgccgggcatggcgaggtcagcaggcaagataaagccttttgtg
atgtttatacagtcacttcgtgcgagagccgagatggattcggtttcgcagctcatacag
gcaataatcgatgagaccggctatgtcgatgagctgaaggctgagggcacggatgaagca
gagcagcgtattgagaatattgatgagcttataaacaaggctgttgattacgagcagggg
gaggagaatcctactctcagtggctttttggaggaggtagcgcttgtagccgatatagac
ggtcttgacgaaaacagcgactatgtggttcttatgactctgcacagtgctaagggactt
gagtttccgaatgtgtatctggcgggcatggaggatggtcttttcccaagctatatgtca
atcacgagtgatgatgcgacaagcgagatagaggaggaaaggcgtcttgcttatgttggt
atcacgagagccaaggagcatctgaccatcacatcggcgcgtatgcgcatggtgcgtgga
gagacacagttcaacaaggtatcgcgatttgtgaaggagattccgcgtgagcttatgtca
ggtgaggtctatgagccaaagcgccgtgatgatgaccttgaaagaaattcgcagagcacc
tacagaaaggctaaggaggccttcaaaaagacacctacatacggcacagagtatgcgaca
acctttaatacacagcgtacaaggacacctgtctatacacctgtgagcaaccagaagtct
tttgccagtgctaataccaccggaggtctttcatataaggtaggagacagggtatcgcac
atcaagtttggcgcgggagaggtcatggcaatcgtagaaggcggcagggattatgaggtc
actgtggactttgacaaggccggtaccaaaaagatgtttgcttcatttgccaaattgaaa
aaaattgactaa
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