Agathobacter rectalis M104/1: ERE_20600
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Entry
ERE_20600 CDS
T02588
Name
(GenBank) DNA polymerase III catalytic subunit, DnaE type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
era
Agathobacter rectalis M104/1
Pathway
era03030
DNA replication
era03430
Mismatch repair
era03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
era00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ERE_20600
03430 Mismatch repair
ERE_20600
03440 Homologous recombination
ERE_20600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
era03032
]
ERE_20600
03400 DNA repair and recombination proteins [BR:
era03400
]
ERE_20600
Enzymes [BR:
era01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ERE_20600
DNA replication proteins [BR:
era03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ERE_20600
DNA repair and recombination proteins [BR:
era03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ERE_20600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
GIDE
Motif
Other DBs
NCBI-ProteinID:
CBK93959
LinkDB
All DBs
Position
complement(2091532..2095032)
Genome browser
AA seq
1166 aa
AA seq
DB search
MSFCHLHTHTEYSLLDGSNKIKEYVKRVKELGMNSAAITDHGNMYGVVEFYKTAKANDIN
PVIGCEVYVAPNSRFDRETSHGDDRYYHLILLAENNTGYANLMKIVSIGFTEGYYYRPRV
DFETLERYHDGLICLSACLAGEIPRYIVRGFYDEAKEIARKYQDCFGKDNFFLELQDHGI
DDQKLVNQQLLRMSKELEIGLVCTNDVHYTYESDAEAHDVLLCIQTGKKVSDEDRMRYDG
GQFFVKSEEQMRALFPYATEAIENTQKIADRCNVTLEFGNYKIPKYEVPEGYDSAEAFLT
ELCEKGFREKYIGCGEYSVDELKKIHADMDYELGIIKTMGFIEYILIVWDYINWCRTHDC
WVGPGRGSAAGSRVCYCTGITDIDPVKYNLLFERFLNPERVSMPDIDVDFEYAERYRAIE
YVQQKYGHDSVTQIVTFGTMAARGVIKSVGKALDFPYAETDRLAKMVPQELNITIDKALQ
MNPEFKGIYDSDARVHEMIDMAKRLEGLPNHTSVHAAGVVIYPGVASDYVPLGRANDGSP
TAEYNMVQLEELGLLKMDFLGLRTLTVLKDSVKNIKASRGIDVDIDHIDFNDKGTLDFIG
TGKTEGVFQLESAGMQSFMKELSPQSFEDIVAGISLYRPGPMDFIPNYIKGKNNPKEISY
VTPELESILEPTYGCIVYQEQVMQIVQKLAGYTMGQADNIRRAMSKKKQYVIDAERQSFV
YGDKERGIKGCVANGIDEKAANSIYDSMVDFAKYAFNKSHAAAYAKISVQTAWLKNYYPV
EFMAALMTSVIDNSAKAAQYLYSCRDMGIKVLPPDINCGQGEFTAEGDHVRYGMYAIKSL
GRPVIDQIIEERESGGRYRTLSDFIERTCQKELINKRAIENLIKAGACDSLDGTRKQMAM
VYASIVDRVQHDKKSTMAGQMSLFDLVSDEDRQSFELKYPNVGEYDAEEALAYEKEVLGI
YLSGHPLEKYAAALKKNITANAIDFVLEEESGSVKIKDNAHVVIGGMIATKTIKFTKYNQ
AMAFITIEDLTGTVEVIIFPRDYERYQRYLQDDAKIFVIGHATVEDEQNGKIICERIIPF
DELPKQLWLRFDTMDDYKKNESRLLETIRESDGGDEVIIYIADTKQMKKLGRNYSVNANN
ELMEQLLEFLDKENAKIVEKNIEKMC
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttgtcatcttcacacccataccgagtacagtctgctcgatgggtcaaacaag
ataaaagaatatgtaaagcgcgtcaaggagcttggcatgaactctgccgcaatcacagac
catggcaatatgtacggtgtggtggagttttacaagacggcaaaggcaaatgatatcaat
ccggtcataggctgcgaggtatatgtggcaccaaattcgcgctttgacagggagacaagc
cacggtgatgacaggtattatcatctgattctgcttgctgaaaataatacaggctatgcc
aatctcatgaagatagtgtcaatagggttcacagagggctattattacagaccgagagtg
gattttgagacgcttgagagatatcacgatgggcttatatgcctgtctgcctgtctggca
ggagaaatcccaagatacatcgtaagaggcttttatgacgaggcgaaggagattgcaagg
aagtatcaggactgctttggaaaagacaacttcttccttgagctgcaggaccatggcatt
gatgaccagaagcttgtgaatcagcagcttcttagaatgagcaaggagcttgaaataggg
ttagtgtgtactaatgatgtgcactacacctacgagtccgatgcggaggcacatgatgtg
cttttgtgcatccagaccgggaaaaaggtgtctgacgaggacaggatgcgctatgatgga
gggcagtttttcgtaaagagcgaagagcagatgagagcgcttttcccatatgccacagag
gctattgagaatacgcagaaaattgccgacagatgcaatgtgacgcttgagtttggcaat
tacaagattccaaagtatgaggtgccagagggctatgatagtgccgaagccttccttaca
gagctttgcgagaagggctttagggagaaatacataggctgtggcgagtacagtgttgat
gagcttaaaaagatacatgcagatatggactatgagcttggtatcataaagaccatgggc
tttatagagtatatccttatcgtgtgggattatatcaactggtgccgcacgcacgactgc
tgggtaggcccgggacgaggatcggcggcgggaagcagggtgtgctattgtaccggaatc
acggatattgatccggttaaatacaatctgctttttgaaagatttcttaaccctgagcga
gtttccatgcctgatatcgatgtggatttcgagtatgcggagagatatcgcgccatagag
tatgttcagcagaagtacggacacgattctgtaacacagatagtcacatttggtacgatg
gcagcaagaggtgtcataaaatcagtcggaaaggcactggatttcccatatgcagagact
gacaggcttgcaaagatggtgcctcaggagcttaatatcacgattgacaaggctcttcag
atgaacccggagtttaagggcatttacgacagtgatgcgagagtgcatgaaatgatagat
atggcaaaaaggcttgagggactgccaaaccacacgtccgtgcatgcagcaggtgtggta
atctatccgggtgtggcgagcgattatgtgcctcttggaagggcaaacgacggaagccct
accgcagagtacaacatggtacagctcgaggagcttggccttttaaagatggattttctg
gggcttcgtacactcacggtgctaaaggattctgtgaagaatatcaaggcatcaaggggg
attgatgtggatatcgaccatattgatttcaacgataagggtacacttgactttatcgga
acaggaaagacggaaggggtattccagctagagtctgccggtatgcaaagcttcatgaag
gaactcagtccacagagctttgaggacatcgtggccggtatttcgctataccgtccgggt
cctatggatttcattcccaactatataaagggcaagaacaatccaaaggagataagctat
gtgacacctgagcttgagagtattttagagccgacctacggctgtatagtatatcaggaa
caggtcatgcagatagtgcagaagctcgcaggctatacaatgggtcaggcggacaacatc
cgccgtgccatgagtaagaagaagcagtatgtcattgacgcagagcgccagagctttgtg
tacggagacaaggagcgcggtataaagggctgtgtggcaaacggcatagatgaaaaggct
gccaacagcatatacgattcgatggttgattttgctaagtatgcgttcaacaaatcacat
gcagccgcgtatgcgaaaatcagtgttcagactgcatggctcaaaaactactatccggtc
gaatttatggcagcgctcatgacttctgttatagacaattcagccaaggcggcgcagtat
ctttacagctgtcgtgatatgggtattaaggtgcttccgccggatatcaactgtggacag
ggcgagtttaccgcagagggtgaccatgtcagatatggcatgtacgccatcaaatctcta
ggcaggccggtcatagaccagataatcgaggagcgggaaagtggcggcagataccgtaca
ctctctgattttatcgagagaacctgccagaaggagcttatcaacaagcgtgcgattgag
aatctgataaaggcgggagcctgcgattcactcgacggcacgagaaagcagatggcaatg
gtgtatgcatcgattgtggacagggtgcagcatgacaaaaagtcaacaatggcagggcag
atgagcctgtttgacctggtctcagatgaggataggcagtcatttgagcttaagtatcca
aatgttggtgaatatgacgcagaggaagccctggcctatgaaaaagaggtgcttggcatc
tatttaagcggacaccctctggaaaaatatgcagctgccctaaagaaaaacatcacagca
aatgcgatagattttgtgcttgaagaggagagcggttccgtaaagataaaggacaatgcg
cacgtggtaatcggaggcatgatagccacaaagacgattaagtttaccaagtacaatcag
gccatggcttttatcacgatagaggacctgacaggaactgttgaggtaattatttttccg
agagattacgagcgctaccagagatatttacaggacgatgctaaaatatttgttatcgga
catgcgacagtcgaggatgagcagaacggcaagataatctgcgagagaatcataccgttt
gatgagcttccgaagcaactatggcttaggtttgatacgatggatgactataagaaaaac
gagagcaggcttcttgagacaatccgtgaatccgacggaggagatgaggtcataatttac
atcgcagatacaaagcagatgaaaaaacttggcagaaattattccgtaaatgcaaataat
gagctcatggagcagcttttggaatttttagacaaagaaaatgcgaaaattgttgaaaag
aatattgaaaaaatgtgctaa
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