Agathobacter rectalis M104/1: ERE_29480
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Entry
ERE_29480 CDS
T02588
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
era
Agathobacter rectalis M104/1
Pathway
era03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
era00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ERE_29480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
era03019
]
ERE_29480
03016 Transfer RNA biogenesis [BR:
era03016
]
ERE_29480
Enzymes [BR:
era01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ERE_29480
Messenger RNA biogenesis [BR:
era03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ERE_29480
Transfer RNA biogenesis [BR:
era03016
]
Prokaryotic type
tRNA degradation factors
ERE_29480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
CBK94749
LinkDB
All DBs
Position
complement(3033186..3035276)
Genome browser
AA seq
696 aa
AA seq
DB search
MYKSYSMELAGRTLTVDIGRVAAQANGTVFIKYGDTTVLSTATASDKPRDGVDFFPLSVE
FEEKMYSVGKIPGGFNKREGKASENAILTDRVIDRPMRPLFPKDYRNDVTLNNLVMSVDP
ECRPEIVAMIGTALAVHISDIPFDGPCAMTQMGLVDGEFIVNPSQKQWDEGDLQLTVAST
KEKVIMIEAGANEIPEDQMIEAIYKCHDINQTVIAFMDQIRDEIGKPKHEYESCAIPEQM
FEDIKKIVTPEQMEEAVFTDEKQKREENIRAITEQLEEAFADNEEYLAVLGEAIYQYQKK
TVRKMILKDHKRPDGRAINQIRPLAAEVDLIPRVHGSAMFTRGQTQICDVVTLAPLSEIQ
KIDGLDANITTKRYMHHYNFPAYSVGETKVSRGPGRREIGHGALAEKALVPVLPSVEEFP
YTIRAVSETFESNGSTSMASTCASCMSLMAAGVPIKAMVAGISCGLVTGDTDDDFLVLTD
IQGLEDFFGDMDFKVTGTHKGITAIQMDIKIHGLTRPIVEEAIARTREARLYIMDEVMSK
AIAEPRKEVNEWAPKIEQITIDPSKIGDVVGQKGKTINEIIDRTGVKIDITDDGAVSVCG
TDKEMIAKAIDMIKIITTDFEQGQILEGTVVSIKEFGAFIEFAPGKEGMVHISKIAKERI
NRVEDVLTLGDKVKVVCLGKDKMGRISFSMKDVKED
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaagttattcaatggaacttgccggcaggactcttactgtagatatcggaaga
gtagcagctcaggcaaacggaactgtttttatcaagtatggtgatacaacagtcctttca
acagctacagcatctgacaagccacgtgacggtgtggatttcttcccactcagcgttgag
ttcgaggagaagatgtactctgtaggaaaaattccgggtggttttaacaagcgtgaggga
aaggcatctgagaacgccatccttacagatcgtgtaattgaccgtcctatgagacctctt
ttcccaaaggattacagaaatgatgttacattaaacaaccttgtcatgtcagtggatcct
gagtgccgtcctgagatagttgcaatgatcggtacagctcttgctgttcatatatcagat
attccgtttgacggaccatgtgccatgacacagatgggacttgttgatggtgagtttatc
gtaaacccttcacagaagcagtgggatgagggcgatttacagctcacagttgcttctaca
aaggaaaaggtcatcatgattgaggcaggcgccaatgagattcctgaggatcagatgatt
gaggcaatctacaagtgtcatgatatcaaccagacagttatcgcattcatggatcagatc
cgtgatgagattggcaagccaaagcatgagtatgagagctgtgctattccggagcagatg
tttgaggatatcaagaaaattgttactccagagcagatggaggaagcagtattcacagat
gagaagcagaagcgtgaggaaaatataagagctatcacagagcagttagaggaagccttc
gctgacaatgaggagtaccttgcagtacttggtgaggctatttaccagtatcagaagaag
acagtcagaaagatgattttaaaggatcataagcgtccggacggccgtgcaatcaaccag
atcagaccactcgcagcagaggttgatttgattcctagagttcacggctctgcaatgttt
acccgtggacagacacagatttgtgatgttgtaacacttgctcctttatcagagattcag
aaaatcgacggacttgatgcaaatatcacaacaaagagatatatgcatcactataacttc
cctgcatactctgtaggagagacaaaggtatcacgtggaccgggacgtcgtgagattgga
cacggagcacttgctgagaaggcacttgttcctgtacttccaagcgttgaggagttccca
tatactatccgtgccgtatctgagacatttgagtcaaacggctctacatcaatggcttca
acatgtgcatcatgtatgtcacttatggctgcaggtgttccgattaaggctatggttgcc
ggaatctcatgcggacttgtaacaggcgatacagatgatgatttccttgtacttacagat
atccagggccttgaggatttcttcggagatatggatttcaaggtaacaggtacacataag
ggtattacagctatccagatggatatcaagattcacggacttacaagacctatcgttgag
gaagcaatcgcgagaacacgtgaggcacgtctctacatcatggatgaggtcatgagcaag
gcaatcgctgagcctagaaaagaagtaaatgagtgggctccaaagattgagcagattaca
atcgatccatcaaagattggtgatgttgtcggacagaagggtaagacaatcaacgagatt
atcgacagaaccggtgtcaagatcgatatcacagatgatggcgctgtttcagtttgcgga
acagataaagagatgattgcaaaggcaatcgacatgattaagattatcacaactgatttt
gagcagggacagatccttgagggaacagttgtaagcatcaaggagttcggtgctttcatc
gaatttgctcctggcaaagagggaatggttcacatttctaagattgcaaaagagagaatc
aacagagtagaggatgtactcacacttggagacaaggtaaaggttgtttgccttggcaag
gacaagatgggaagaatcagcttctctatgaaggatgtaaaagaggattaa
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