Agathobacter rectalis M104/1: ERE_29520
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Entry
ERE_29520 CDS
T02588
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
era
Agathobacter rectalis M104/1
Brite
KEGG Orthology (KO) [BR:
era00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
era03016
]
ERE_29520
Enzymes [BR:
era01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ERE_29520
Transfer RNA biogenesis [BR:
era03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ERE_29520
Prokaryotic type
ERE_29520
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
IF3_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CBK94753
LinkDB
All DBs
Position
complement(3038139..3039038)
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AA seq
299 aa
AA seq
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MVNGIINVYKEKGYTSFDVVAKLRGIFHQKKIGHTGTLDPDAQGVLPVCLGKATRVCDLL
TDKDKVYKAVLLLGQETDTQDISGQVLNQAEVNVTEQAVYDAISQFIGRQKQVPPMYSAL
KVNGKKLYELAREGKVIERKARDIEVFDIKVESIDLPEVTMTVHCSKGTYIRTLCNDIGE
RLGCHGCMKSLLRVRVAGFDLEHALTLSQIQSKVDEGCFDMVMPVDGVFENLPAVHTASD
ADKLVRNGNKIPAVLTDYLKHSADSDIRYRVYNHEGIFVGVYSYLDETGEFKPVKIFME
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggttaatggaataatcaatgtatacaaggaaaagggctatacaagctttgacgttgtg
gcaaagcttcgaggcatattccaccagaagaagattggtcatacaggtacacttgatcct
gatgcgcaaggcgtccttcctgtctgccttggaaaggcaaccagagtgtgtgaccttttg
acagataaggacaaggtctataaagctgtgctgcttttaggacaggagacagatacacag
gatatttcagggcaggtcttaaatcaggctgaggtcaatgtgactgagcaggcggtgtat
gatgcaatatcacagtttattggcagacaaaagcaggtgccgccaatgtattcggctcta
aaggtcaatgggaaaaagctctatgagcttgccagggagggcaaggttatagagagaaaa
gccagggatatcgaggtgtttgatatcaaggttgaaagcattgatttaccggaggttacg
atgacggtgcactgttcaaagggcacatatatcaggacgctgtgcaatgacatcggagag
aggctgggttgccatggctgcatgaagtcactgcttagagtaagggtagcaggctttgac
ttagagcatgcacttacactttcacagattcagtcaaaggtggatgaaggctgctttgat
atggtgatgcctgttgacggagtattcgaaaatctgccggcagtgcatactgcttcagat
gctgataagcttgtcagaaatggaaataaaattccggcagtgcttacggattatttaaaa
cacagtgctgactctgatataagatacagagtatacaatcatgagggcatatttgtcggg
gtgtattcgtatcttgatgagaccggtgagtttaagccggttaagatttttatggaatag
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