Agathobacter rectalis M104/1: ERE_31600
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Entry
ERE_31600 CDS
T02588
Name
(GenBank) Topoisomerase IA
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
era
Agathobacter rectalis M104/1
Brite
KEGG Orthology (KO) [BR:
era00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
era03032
]
ERE_31600
Enzymes [BR:
era01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ERE_31600
DNA replication proteins [BR:
era03032
]
Prokaryotic type
DNA Topoisomerases
ERE_31600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
DUF4099
C1_2
Motif
Other DBs
NCBI-ProteinID:
CBK94930
LinkDB
All DBs
Position
3268916..3272665
Genome browser
AA seq
1249 aa
AA seq
DB search
MGKSLIITEKPSVAQEFAKVLRVSGRNDGYIENGEYVISWCVGHLVGLVYPESYDMKYKK
WRLEDLPFLPKEYKYDVIDSVRKQYNIVHALLQREDIDRVYWAGDAGKEGQTIEENIRNF
GGVREGMEELRVWIDSQTEEEILRGIKEAKPMSAYANLGKSGIMRTIEDYAMGINFSRVM
SVKYGNLLNDAAGTRSYTAIAVGRVMTCVLGMVVIREREIRNFKETPFYRVIGRFTDAGV
EAEWKAVEGSRYFESPLLYKENGFKEEKDALALIEELNGKQAKVKSIVKNITKKRAPLLF
NLAELQAECSKKFKISPDETLQVAQDLYEKKLTTYPRTDARVLSSAVAKEIGKNISRLKG
FEPTADFVEHIMQKRLYANIADTQYTDDSKVTDHYAIIPTGQLTELSGLTSLQRAVFELI
VRRFLSIFYPPAEYENVKLVVDVDKESFFASSKVLKSEGYLQVANPPKKKSFEESNARIL
GKNSETADSTDENSAANGSNDEIVVNPKVMLELADKLKAGDEIACQGYNIKFGKTSPPKR
YTSGSMVLAMENAGQLIEDEELREQIKGSGIGTSATRAEIIQKLVRIGYLNLNKKTQILT
PESLGEMVFEVVYMTVPALLNPKMTANWEKGLDGITRGTVDFWEYRGKLESFIRKETEKM
IEQNLRPEIADRISSFAGKNARGAAARRKIGVKCPVCGGEIVTTPFGYGCANYKNDKSGC
NFNIGQVAGLDIPEEQVKKLIEEGITDTIRGFKSKSGKRFDACLKLNKDEQTNKVSATFD
FENVKPQKVEGIVCPDCGGDIYVSPYGYRCANYNRQTEDGCHFFVGRIADKQLSQVQFLE
LMANGRTETIKGFKSKSGKRFNACLVLKKEPVTEGGEKMHTVVAFDFDNVEDEIIKDVVC
PLCGGQIKKTSFGYGCVNYKGDEPGSCRFSVGQIAGKTITAANLKQLLNDKKTETIRGFK
SKSGKRFDACLVLKEDENKKLSVQFDFDHVEPKTVKDVVCPKCGGKIQVAPFGFVCENNR
RDDPESCRFMVGKVASVKIKESVLKELLTKKKTEVISGFVSKTGMKFDAPLKLTEDGDIA
FDFPEKPKPIETNVLCPKCGRPLKKTQWKYECECGFNVWHTVAKVELSEEILTELFTTGK
TKKKVTGFTSKAGNVFDTCLKFENDQISFDFDNPGEEEVQSTAEVHNNADTHNNAEVQST
ADDAPDETTMNEMGIPEEFLAGFDMAADSAQADDVSEAALAAAHELFGE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcactgataataacagagaagccatccgtggcacaggaatttgcgaaggtg
ctgcgggtgagcggacgcaatgacggttatatagaaaatggagaatatgtgatttcatgg
tgcgtgggacatcttgtcgggctggtctaccctgagtcatacgacatgaaatacaagaaa
tggcgtcttgaggatctgccgtttctgccaaaggaatacaaatatgatgtgatagacagc
gtgcgcaagcagtacaatattgtgcacgctcttttgcagagagaggacattgacagagtt
tactgggcaggtgatgccggaaaagaaggacagaccatcgaggagaatatcagaaacttt
ggtggtgtcagggaaggcatggaggagcttcgagtctggatagattcgcagaccgaggag
gaaatcctaagaggcataaaagaggcaaagccgatgagtgcgtatgcaaacctcggaaag
agcggcatcatgcgtaccatcgaggattatgcgatgggcatcaacttttcgcgtgtcatg
tcggtcaaatacggcaatctgctaaacgatgcagcaggcactcgctcgtacacggcaatc
gcggttggacgagtgatgacctgtgtgcttggaatggtagtaatccgtgagcgcgaaatc
agaaactttaaggaaactccgttttacagggtaatcggcaggtttacggatgccggtgta
gaggcagagtggaaggctgtagaaggctcaaggtactttgaatcaccgcttttatacaag
gaaaacggcttcaaagaggaaaaagatgcacttgctttaattgaagaattaaacggcaaa
caggcgaaagttaaatctatagttaagaatattactaaaaaaagagcaccgcttcttttc
aacctggcggagctgcaggcagagtgctcaaagaagtttaaaatcagccctgatgagaca
ttacaggtggctcaggatctgtatgaaaaaaagcttactacctatcctagaacagatgcc
agagtgctttcaagcgctgtggcaaaggagattggaaaaaatataagcaggcttaaaggt
tttgaaccgacagcagactttgtggagcatattatgcaaaagaggctatatgccaacata
gcagatacgcagtacacggatgacagcaaggtaacagaccactatgctatcattccgaca
ggtcagcttacagagctttcggggcttacatcgcttcaaagagcagtatttgagctgatt
gtcaggcgtttccttagtattttttatccaccggcagagtatgagaatgtgaagcttgtt
gtagatgtggataaggaaagcttttttgcatcatcaaaggtactaaagagcgagggctat
ttacaggtggcgaatccgccgaaaaagaagtcgtttgaggaatcaaacgcacgaatactt
ggtaaaaacagtgaaactgcagatagtacagatgaaaacagcgcagcaaacggcagcaat
gatgagatagtcgtaaatcccaaggtgatgcttgagcttgccgataagctaaaggcgggt
gatgagatagcatgccaaggctataatatcaagtttggtaagacatctccgccaaagcgc
tatacatcaggctccatggtgcttgccatggaaaatgcaggacagcttatcgaggacgag
gagcttcgtgagcagataaagggctcaggaataggcacctcagcaacgagagcggagata
atccagaagcttgtccgtataggatatctgaatctgaacaaaaagacacagatactcaca
cctgaaagccttggcgagatggtgtttgaggtcgtatacatgacagttccggcacttctt
aatccaaagatgacagccaactgggaaaagggactggacggaattacaaggggcacggtg
gatttctgggaatacaggggaaagcttgagagctttatccgcaaagagacagaaaagatg
attgagcagaatctgcgccctgagattgcagaccgcatcagcagctttgcaggcaaaaat
gccagaggtgcggcggccagacgaaagataggtgtcaagtgcccggtctgcggcggtgag
atagtgaccacaccgtttggctatggctgcgccaattacaaaaatgataaatcaggatgt
aattttaatatcggacaggtggcaggacttgatattccggaggaacaggtcaaaaagctg
attgaagaaggaatcaccgacacaatccgtggttttaagtcgaagagcggcaaacgcttt
gatgcatgcttaaagctcaacaaggatgaacagacgaacaaggtatcagccacctttgat
tttgaaaatgtaaagccgcaaaaggtcgagggcattgtatgcccggactgtggaggcgat
atatatgtgtcgccatacggctaccgatgtgcaaactataacagacagacagaggatggc
tgccatttcttcgttggaaggatagcagacaagcagctgtcacaggtacagtttttagag
ctcatggcaaacggcagaacggagacgataaagggctttaaatcaaaatcgggaaagcgc
ttcaacgcatgccttgtcttaaagaaagagcctgtcacagagggcggtgagaaaatgcac
accgtcgtagcatttgactttgacaatgtggaggatgaaataataaaggatgtcgtctgt
ccgctttgtggtggtcagataaaaaagacatcgtttggatatggctgtgtgaactacaag
ggtgacgagccgggaagctgccgcttttcggtgggacagattgcgggaaaaacaatcaca
gccgcaaacctaaagcaacttcttaatgataaaaagaccgagaccatacgaggctttaaa
tccaaaagcgggaaacgcttcgatgcgtgcctggtgcttaaggaggatgaaaataaaaag
ctttctgttcagtttgattttgaccatgtagagccaaagacagtgaaggatgtagtatgt
ccgaagtgcggaggcaaaatccaggtggcaccgtttggatttgtatgcgagaacaacaga
cgtgatgatcctgagagctgccgctttatggtgggcaaggtcgcaagcgtcaagataaag
gaatcagtccttaaggagcttctgacaaagaaaaagacagaagttatatcaggatttgtc
tcaaagacaggcatgaagtttgacgcaccgctaaagctcacagaggacggagatatagcc
tttgatttccccgaaaaaccaaagccaatcgagaccaatgtactctgtccaaagtgtggc
agacctctcaaaaaaacacagtggaaatatgagtgtgagtgcggcttcaatgtttggcat
actgtggcaaaggtggagctttcagaggaaattctcacggagctgtttaccacaggaaag
accaaaaagaaggtcacaggcttcacctccaaggcgggaaatgtattcgatacatgtctt
aagtttgaaaatgaccagatatcatttgatttcgataaccccggcgaggaagaagtgcag
agcacggctgaagtacataacaatgctgatacacataacaatgctgaagtgcagagcacg
gcagatgatgcgccggatgagacaaccatgaatgagatgggaatcccagaggaatttctg
gcaggatttgatatggcagctgatagtgcacaggcagatgatgtgtcggaggcggcactt
gcggcggcgcatgagctgttcggtgagtag
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integrated database retrieval system
