Agathobacter rectalis M104/1: ERE_34220
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Entry
ERE_34220 CDS
T02588
Name
(GenBank) DNA polymerase III, alpha subunit (gram-positive type)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
era
Agathobacter rectalis M104/1
Pathway
era03030
DNA replication
era03430
Mismatch repair
era03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
era00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ERE_34220
03430 Mismatch repair
ERE_34220
03440 Homologous recombination
ERE_34220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
era03032
]
ERE_34220
03400 DNA repair and recombination proteins [BR:
era03400
]
ERE_34220
Enzymes [BR:
era01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ERE_34220
DNA replication proteins [BR:
era03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ERE_34220
DNA repair and recombination proteins [BR:
era03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ERE_34220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_B_exo1
DUF6745
Motif
Other DBs
NCBI-ProteinID:
CBK95167
LinkDB
All DBs
Position
complement(3475747..3476784)
Genome browser
AA seq
345 aa
AA seq
DB search
MNINLVSLWDEIKDKKIVVYDLETTGFKSKNTRILSFSAIRYQVSEHGMDEIDRRNMFLN
PMMTIPAYITAVNHITNEKVADCPTEYEAGAEILSYLNSADFVSGYNNANFDDGLVNEMA
RRIGFGKWIPKNEIDVMILAKAVLTKQDVPNFKLGTLAEYFHADAGLEFHNSIDDVIATS
RVLWGLVNKCRTDEHDEGSVVNASFEAGNTEASDEDIYSQHVAVLPVNDNSNSVSEQVKA
AVVDERKPVALDPSKWKTFSNEDLTDAPVETKCKVKNDPLTAVLWEKNGYRRLYINNSLN
HPVYYDVKLRRWQYNFDEDERMISRIDDEYDVDELVRRRKYSFTA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaatcttgtatccctgtgggatgagattaaagataaaaagatagtggtatat
gatttggaaacaaccgggtttaaatcaaagaataccagaatactgtcgttttcagcaatc
aggtatcaggtaagtgaacatggtatggatgaaattgacaggcgcaatatgtttttgaat
ccgatgatgaccattcctgcatatatcactgctgttaatcatattacaaatgaaaaagtt
gctgattgtccaacggaatatgaagctggtgctgagatattaagctatcttaattcagca
gactttgtttcaggctataataatgcgaatttcgatgatgggcttgtaaacgaaatggca
agacgaattggttttggcaagtggatcccaaagaatgaaattgatgtcatgatacttgca
aaagcagttcttacaaagcaggatgtaccaaactttaagctgggcacgctggcagaatat
tttcatgcagatgctggattggagttccataacagtattgatgatgtaattgcaacatca
agggttttatggggacttgttaataaatgcaggactgatgaacatgatgagggctctgtt
gttaatgcatcgtttgaagcgggcaatacagaagcttctgatgaagatatttattcgcag
catgtagcagtgcttcctgttaacgataacagcaattctgtttctgagcaggtgaaagct
gcagttgttgatgaaagaaaaccggtagcacttgacccgtcaaagtggaaaactttcagc
aatgaagatttaactgatgcacctgtggaaacaaaatgtaaagttaaaaatgatccgctt
acggcagtactgtgggaaaaaaatggttatagaaggctttatatcaataattcccttaat
catccggtttattatgatgtaaaattgcgtaggtggcagtataattttgatgaagacgaa
cgcatgataagtagaatagacgatgaatatgatgttgacgaacttgtcagaagaagaaaa
tacagcttcactgcgtaa
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