Agathobacter rectalis M104/1: ERE_35130
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Entry
ERE_35130 CDS
T02588
Name
(GenBank) Superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
era
Agathobacter rectalis M104/1
Pathway
era03420
Nucleotide excision repair
era03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
era00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERE_35130
03430 Mismatch repair
ERE_35130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
era03400
]
ERE_35130
Enzymes [BR:
era01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERE_35130
DNA repair and recombination proteins [BR:
era03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERE_35130
MMR (mismatch excision repair)
Other MMR factors
ERE_35130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_12
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
CBK95251
LinkDB
All DBs
Position
3562791..3564812
Genome browser
AA seq
673 aa
AA seq
DB search
MEKREITKAMKDAWVQHLLSKFLLITFTDAAAAEMRTRLAGAFLTEGYEIDPEKIPTMTF
NSFAMDLVKEFYNDLGFLKTPIIVDTNPTREAMGILPLITRDKVDGLNYNVAVESQYGAL
TIAIKVFKLIKSSRIDFSKPGATEEFANKFLRPANLYKYMSDQSIEQLVDLYHEYEQILT
SQGLLTFADQEPMALSVLDMHPDQLAKFGFEHIVVDEFQDSSDIQMEFIKLFADCPTVKD
IMVIGDDNQSIYGFRNANPDNMIHFQEKLGKPVTSLLMTQNYRSYEEIIDLANKLVALNV
NRIDKPLVAAKGAGGTVSVRGFYNEPDEQKYIADNIKKLLEDGYKPEDIAIITFSKKELM
KFAAAFSKEGIPWVMMAPVKVIENSRVLAAMSLADAFYEPEATQSYFNYLVAKYDGKILE
ELTDDEINKEIEELRSTFSGIDNAAFNFQQKTFHDMLEALDPEKVDEIYQKWLEQVYENE
DLPSELQFIQNFKRFGKNTELKMDQKYEGVTLTTAHSSKGLEWKVIFNSISSYDSKRYLY
GRHQDEVEEKRRLLFVSMTRAKEKLFVTGQYKFCTDEKNGDIYNRFLKELYEIVDPELKS
YVPVDPMKAIREEERRQERNRKAREKRAAQKAAKAVDDDSNIDMNAKSRPMTAKEKAEYE
ALVKNSVQATLFS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagagaaattacaaaggcaatgaaagatgcatgggtacagcacttactaagc
aaatttttactcatcaccttcactgacgcagccgcagcagaaatgagaactcgtctggca
ggagcgttcttaacagagggctacgagattgatcccgagaaaattcctaccatgacattc
aattcatttgcaatggatttggtaaaggagttttacaatgatttaggatttctcaagaca
cctatcattgtagacacaaatcctacaagagaggcaatgggaattctgccactcataact
cgtgataaggttgacggtttgaattataacgttgcagttgagtcccagtatggtgcactt
acaatcgcaatcaaagtatttaaactgataaagtcaagcagaattgacttcagcaagccg
ggagcaacagaggaatttgctaacaagttcctcagaccagcaaacttgtacaaatacatg
tctgaccaaagcattgagcagttggtagacctgtatcatgaatatgagcagatcctcaca
tcacagggactgcttacattcgcagatcaggagccaatggcactgtcagtacttgatatg
catccggaccagcttgcaaagttcggatttgaacacatcgttgttgacgagtttcaggac
tcatcagacattcagatggaattcattaagctctttgcagactgcccgacggttaaggat
attatggtgatcggtgacgataaccagagtatctacggtttccgtaatgccaatcccgac
aacatgatccactttcaggagaagcttggcaaaccggtaacatctcttcttatgacacag
aactaccgttcatatgaggagataattgaccttgcaaacaagctggttgcacttaatgtc
aatcgtattgacaaaccgcttgttgcagcaaagggtgctggcggaactgtttcagttagg
ggattttacaatgagcctgatgaacagaaatacatcgctgacaacatcaagaagctgctt
gaagatggctataagccggaagacattgcaatcatcacattctctaaaaaggaattaatg
aagtttgcagctgcattttcaaaggaaggaattccttgggtaatgatggctccggtaaaa
gtcattgaaaacagcagggttctggcagcaatgtcattggcagatgccttctatgaacca
gaggcaactcagtcatattttaactaccttgtagcgaagtatgatggcaaaatccttgaa
gaactcaccgatgatgagattaacaaggagatagaggagcttcgttcaacatttagtgga
attgataatgctgcgtttaatttccagcaaaaaacattccacgacatgctcgaagcactg
gatcctgaaaaagtagacgaaatctaccagaaatggttagagcaggtctatgaaaacgag
gatcttccgtctgagcttcagttcatccagaatttcaaacgttttggcaagaacacagag
cttaagatggatcagaagtatgaaggtgttactcttacgacagctcattcttcaaaaggt
cttgagtggaaggtaattttcaattcaatttcaagctatgattccaagagatatctctat
ggaagacatcaggatgaggttgaggagaaaagacgtctacttttcgtttcaatgacaaga
gcaaaggaaaaactgttcgtaaccggccagtataagttctgtactgacgagaagaatggt
gacatctacaatagattcctcaaggaactgtatgagatagtcgatcctgaacttaagtca
tacgtgccagtcgatccaatgaaagctatccgtgaggaagagcgtcgtcaggagagaaac
agaaaggcgcgtgagaagagagctgcacagaaagctgccaaagcagtggatgatgacagt
aacattgacatgaatgctaagtcaagacctatgaccgcaaaggaaaaggctgagtacgaa
gcgcttgtcaagaactctgttcaggcaacgttattctcttaa
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