Agathobacter rectalis M104/1: ERE_35360
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Entry
ERE_35360 CDS
T02588
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V), alpha subunit-helicase superfamily I member
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
era
Agathobacter rectalis M104/1
Pathway
era03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
era00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ERE_35360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
era03400
]
ERE_35360
Enzymes [BR:
era01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ERE_35360
DNA repair and recombination proteins [BR:
era03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ERE_35360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
PIF1
SH3_13
nSTAND3
TrwB_AAD_bind
IpaB_EvcA
DEAD
NAT10_TcmA_helicase
SLFN-g3_helicase
AAA_28
NPHP3_N
T2SSE
OB_YrrC
AAA
BPP1_LPA
DUF3391
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CBK95273
LinkDB
All DBs
Position
3583973..3586087
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AA seq
704 aa
AA seq
DB search
MSEKVLTGIIKSIKDDEQKFCLFTTDKSAYRDLQGRTWCKGDIGNLTEGMTVECRGDWEK
HTFVFNKIKPVWISLQTTISYLINATASYGIRKMDITAICSKYGRKLFSTDKRELTDLIL
NDFPNMDAENVTIFVNALNLKDKALCELEDYLIPYGFKAEKVKEMYKFYGVNAINKIKCD
PYKACHIFDVNFKIADQIAFDSKMEPLNKRRIAGLVREALKNAGNYGHTIALPKDVANFV
SYKSRQSVYRMEIPAVLVSYTVITDKEFILKDGYVSLYYLYKAEKDIAKGLIALKNIGPY
SSISDADIKRIEKELGTSYGKDQKKAFKMFETGGVNILTGGPGTGKTTTLNGIINHIRHI
NPNAVILLCAPTGRAAKRMSESTGMDAETIHKMCGLKPYKTEEFNDKQNVLPITADFVIC
DEFSMVSADLAATLINAMKRGTRFIIVGDEHQLPSIEPGNVLHDLIASGKFPVYRLEENF
RQANGSSIQPNADRILAEQMPVSTNDFQIYKAKDEQDSYKALKYFMNMYYDKNDPYKVQL
IEPSRKGAAGTFKMNRYMHNKLILNNENGDDYVPKTGDKIIFSRTDYDEGYVNGDMGIIT
GLSNHVMNINLEGYPITVSRKSMADVEFGYSYTIHKSQGSENPIIIIYLPEKMKHMMTNS
LLYTAVTRARNTVIIIYEDDSLETCIHNKSDAVRNTRLLMFLTA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaagttttgacaggaattataaagtcaataaaggatgatgaacagaaattc
tgtctttttactacagataaaagtgcatacagggatttgcagggcaggacatggtgtaaa
ggcgatattggaaacctcacagagggaatgacagttgaatgtcgtggtgactgggaaaaa
catacatttgtttttaataaaataaagccggtatggataagtcttcagacaacaatatca
tatttaattaatgcaacagcttcatatggcattagaaaaatggatattacagctatatgc
agcaagtatggaagaaaactgttttctacagacaaaagggaattaaccgatttgatatta
aacgattttcctaacatggatgcagagaatgttaccatatttgttaatgcattaaatctt
aaagataaagcattgtgtgaattggaggattatctgataccatatggatttaaagcagaa
aaagtcaaagaaatgtataagttctatggtgtgaatgcgataaataagattaaatgcgat
ccatacaaagcctgtcatatatttgatgtcaactttaaaattgcagaccagattgcattt
gactcaaaaatggagcctttaaataaaaggcggatagcaggtcttgtaagagaagctctg
aaaaatgctggaaattatggacatacaatagcgcttccaaaggatgtagcaaattttgtt
tcatacaaatcaagacagtcggtttacagaatggaaataccggcagttttagtgtcatat
acagtgattactgacaaagagtttattttaaaagacggttatgtttcactttattactta
tataaagctgaaaaagatatagcaaaaggacttattgcattaaagaatattggtccatat
tcatcaatatctgatgcagacataaagagaattgagaaagaattgggtacatcgtatgga
aaggatcagaaaaaagcgtttaaaatgtttgaaacgggcggagttaatattttaactggc
ggcccgggaacagggaaaacgacaacacttaatggaataatcaatcatatcagacacata
aatccaaatgcagtcatacttttgtgtgcacctacaggaagagcagcaaagagaatgtca
gagtcaacaggaatggatgcagaaacaatccataaaatgtgcggactgaagccatataaa
acggaagaatttaatgacaaacagaatgtactgccaataacggctgactttgttatatgc
gatgagttttcaatggtgtcagcagatcttgcagcaacacttatcaatgcaatgaaaaga
ggtacacgttttatcatagtaggagatgaacatcagcttccatccattgagccgggaaat
gtattacatgatttgattgcatcaggaaagtttcctgtatatagactggaagaaaatttc
agacaggcaaacggcagttcaatacagcctaatgcagatagaattcttgcagaacaaatg
cctgtcagcacaaatgattttcagatttacaaagcaaaggatgaacaggattcatataag
gcattaaaatactttatgaatatgtactatgataaaaatgatccatataaagtccagctt
atagaaccgtcacgaaaaggggccgcaggaacatttaaaatgaaccgttacatgcataac
aagctgattttgaataatgaaaatggtgatgattatgtaccaaaaaccggagacaagatt
attttcagcagaactgattatgacgaaggctatgtaaatggtgatatgggaataataact
ggtctgtcaaaccatgtaatgaatatcaatcttgagggttatcctataacagtatcaaga
aaaagcatggctgacgtggaatttggatattcctatacaatccataaatcgcagggctct
gaaaatccaataattatcatatatcttccggaaaaaatgaagcatatgatgacaaactca
cttttgtatacagcagttacaagagcaagaaacacagttattattatttatgaagatgat
tctttggaaacatgcattcataataaatcagatgcagtaagaaatacgagacttttgatg
tttttaactgcctga
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