Agathobacter rectalis M104/1: ERE_36350
Help
Entry
ERE_36350 CDS
T02588
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
era
Agathobacter rectalis M104/1
Pathway
era03410
Base excision repair
era03430
Mismatch repair
era03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
era00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ERE_36350
03430 Mismatch repair
ERE_36350
03440 Homologous recombination
ERE_36350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
era03400
]
ERE_36350
DNA repair and recombination proteins [BR:
era03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ERE_36350
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ERE_36350
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ERE_36350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
CBK95364
LinkDB
All DBs
Position
complement(3676711..3678495)
Genome browser
AA seq
594 aa
AA seq
DB search
MANKWLKRSATPEHISEIVKERTGMSEQELLNDVKVYHINNMQEVMALFTDAVIKRYMMI
FHTDYDGDGINCANIARNLASVLGITDLVKVVVPRRFSDGYGVQVRHVEAYAEWGCKLLI
LADNGIAAIEPVKRAKELGMKVIILDHHEKFVNDQKEVVLPDADVLCDPHVTGADFVDYC
GAGLMYIFANSIVSTCPWLSDGAKEKFHAVTSVYAAIGTVADVVPLTGENRRIVKAGIKN
ALAGRASTGMMELLKDANMLDRITAPQMAFFLCPMFNAYERLDDGGSAEVSDATSYMGVH
DESIENDCQIIKNKNEERKKLAEEAFARAVDYINANNLQNERFIVFVDEDGSAGINGLTA
GKITEKYRRPSIVVSPTIDDNILKGSGRSRYWANLKKILDQSNEFIEKYGGHPGACGITL
TRDKINDFIKAVNDLTPEAPAEEQSDIILYDKECRVVNLRKMFEETEKYQPFGEGNPEIV
FRIDDIDIVGKKRYRAEGVDYYQFMGANKQHVKLFANGFQLIWFGGAEEYKKMGCPLKVS
VLGTLNENIYVPDREAIPRKEYRTLQVQITDLKPADASDKSEWQNIPDEIADMM
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctaataagtggttaaaaagaagtgctaccccggaacacatttctgagatagtaaaa
gaaagaacaggtatgagtgagcaggagcttctaaatgatgtaaaagtttatcacatcaat
aatatgcaggaagtaatggcattgtttacggatgctgtcataaagcgttatatgatgata
tttcacacagattatgatggtgacggcatcaattgtgcaaacatcgcgcgtaatcttgcc
agcgttcttggcataacggatcttgtgaaggtagttgtccctagacgtttttcagacggc
tatggtgtacaggttcgtcatgttgaagcctatgcagaatggggatgtaaacttctcatt
cttgcagataatggtattgctgccattgaacctgtaaagagagcaaaagaattaggaatg
aaagtaatcattctggatcatcatgagaaatttgtgaatgaccagaaagaagtagtactt
cctgatgcagatgttctctgcgatccgcatgtaactggcgctgactttgtagactattgt
ggagctggactcatgtatatattcgcaaattcaattgtgagtacatgtccatggctcagc
gatggagctaaagaaaagtttcatgcagtgacaagcgtatatgctgccattggtacagtt
gccgatgttgttcccctcacaggagaaaacagacgcattgtaaaggctggcatcaaaaat
gcgcttgcaggcagagcgtcaacaggaatgatggaacttcttaaggatgcaaacatgctt
gaccgcataactgcacctcagatggcattctttctgtgtccgatgttcaatgcatatgaa
cgtctggatgatggcggttcagcagaagtttctgatgcaacatcttatatgggtgtgcat
gatgagtctattgaaaatgactgccagattatcaaaaacaaaaatgaggaacgtaagaaa
cttgcagaagaggcttttgctagagcggttgattatatcaatgctaacaatctgcaaaat
gagcgttttattgtttttgtcgatgaagatggttctgctggaatcaatggacttacggct
ggcaagattacagaaaagtaccgccgcccaagtattgttgtcagccctacgattgatgat
aatattttaaagggttcaggccgttctcgttactgggcaaatcttaaaaagatacttgat
cagagcaatgagttcattgagaaatatggtggacatccgggtgcctgcggtattacattg
acaagagataaaatcaatgattttatcaaagctgttaatgacctcactcctgaagctcct
gcggaagaacagtctgacataatcctttatgacaaggaatgcagagttgtaaatctccgt
aagatgtttgaagagactgaaaaataccagccgttcggtgaaggcaatcctgagattgtt
ttcagaattgatgatattgacattgttggcaaaaagcgttacagagctgaaggtgttgat
tattatcagttcatgggagctaataagcagcatgtaaaattgtttgcaaatggtttccag
ctcatctggtttggtggagcagaagagtacaagaaaatgggctgtccgctcaaggtgtcc
gttcttggaacgcttaatgaaaatatatatgtgcctgatcgtgaagcaatacctcgtaaa
gagtatcgtactttacaggttcagattacagacttaaagcctgctgatgctagtgataaa
tctgaatggcagaacattccggatgaaatcgctgacatgatgtaa
DBGET
integrated database retrieval system
